Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq41 129 5e-25
>seq41
Length=3466
Score = 129 bits (142), Expect = 5e-25
Identities = 170/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
||||| || ||||| ||||| | || || || |||| || | ||||| ||||| ||
Sbjct 2973 ATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTGAACCATCT 3032
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| || ||||| | || ||| |||||||||||| |||||||| || ||||| ||||||
Sbjct 3033 GATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCCACCTGATCAA 3092
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|| | ||||||| || || |||||||| ||||| | || | | ||||| ||
Sbjct 3093 CAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGCAGATTATAAT 3152
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCATAACAAA 27223
|||||||| || || |||||||| ||||| | || | ||||| | || |||
Sbjct 3153 ATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGGTAAAAAAAA 3208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434909685322560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |