Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq41 95.1 9e-15 >seq41 Length=3466 Score = 95.1 bits (104), Expect = 9e-15 Identities = 156/222 (70%), Gaps = 5/222 (2%) Strand=Plus/Plus Query 27783 TAGTAAA-ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCG 27841 || |||| |||||||||||||| ||||| | || || ||| ||| ||| | || || | Sbjct 2965 TATTAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGAAGTTG 3024 Query 27842 AAAGCACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCC 27899 || | || | || | ||| || ||| |||||| || ||||||||| |||| Sbjct 3025 AACCATCTGATTCAATTGAAAAT--GTAAAAGCAAAAATTCAAGATAAAGAAGGTATTCC 3082 Query 27900 GATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTC 27959 || || ||| | ||||| ||||| || |||||||| || || | | | | || | Sbjct 3083 ACCTGATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATTAGC 3142 Query 27960 CGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTT 28001 ||||| || || |||||||| || ||||| ||||| ||||| Sbjct 3143 AGATTATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTT 3184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355855447671981