Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq41 145 5e-30 >seq41 Length=3466 Score = 145 bits (160), Expect = 5e-30 Identities = 176/240 (73%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 23598 TTAATTACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGA 23657 || |||| | || ||||| ||||| |||||||| | || || ||||| || || | || Sbjct 2960 TTTATTATTAAAGATGCAAATTTTTGTTAAAACATTAACAGGTAAAACTATAACATTGGA 3019 Query 23658 AGTTGACTCCACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGT 23717 |||||| | | || | |||||| ||||| ||||||| || ||||||||| | Sbjct 3020 AGTTGAACCATCTGATTCAATTGAAAATGTAAAAGCAAAAATTCAAGATAAAGAAGGTAT 3079 Query 23718 ACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTT 23777 || || |||||||| | ||||||||||| || |||||| | ||||| | | | || || Sbjct 3080 TCCACCTGATCAACAAAGATTAATATTTGCAGGTAAACAATTAGAAGATGGAAGAACATT 3139 Query 23778 AGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || ||||| || || |||||||| || ||||||||||||||||| || |||| || Sbjct 3140 AGCAGATTATAATATTCAAAAAGAAAGTACTTTACATTTAGTTTTAAGATTAAGAGGTGG 3199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338002996454324