Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq41 113 1e-19
>seq41
Length=3466
Score = 113 bits (124), Expect = 1e-19
Identities = 144/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 225522 TTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAA 225581
||||||||| | ||| ||||| || || ||||| |||||||||| || || || || ||
Sbjct 3164 TTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAA 3105
Query 225582 GATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TTCACAG 225640
|| | || |||||| || || ||||||||||| || ||||| || |||||| || |||
Sbjct 3104 TATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAAT-TTTTGCTTTTACAT 3046
Query 225641 CTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTA 225700
||| || | || || | ||| || || || || || || || || || || ||||| |
Sbjct 3045 TTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAA 2986
Query 225701 TGAACACTTGCATTTT 225716
|| | |||||| ||
Sbjct 2985 CAAAAATTTGCATCTT 2970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192506707272482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |