Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq41 113 1e-19 >seq41 Length=3466 Score = 113 bits (124), Expect = 1e-19 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 225522 TTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAA 225581 ||||||||| | ||| ||||| || || ||||| |||||||||| || || || || || Sbjct 3164 TTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAA 3105 Query 225582 GATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGC-TTCACAG 225640 || | || |||||| || || ||||||||||| || ||||| || |||||| || ||| Sbjct 3104 TATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAAT-TTTTGCTTTTACAT 3046 Query 225641 CTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTA 225700 ||| || | || || | ||| || || || || || || || || || || ||||| | Sbjct 3045 TTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAA 2986 Query 225701 TGAACACTTGCATTTT 225716 || | |||||| || Sbjct 2985 CAAAAATTTGCATCTT 2970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192506707272482