Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_030240.1
Length=128058
Score E
Sequences producing significant alignments: (Bits) Value
seq41 107 2e-18
>seq41
Length=3466
Score = 107 bits (118), Expect = 2e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 101009 TTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCG 101068
|| || |||| |||||||| || | || ||||| ||||||||||||||| |||||
Sbjct 3202 TTACCACCTCTTAATCTTAAAACTAAATGTAAAGTACTTTCTTTTTGAATATTATAATCT 3143
Query 101069 GCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACG 101128
|| | ||| | |||||| |||||||| || ||| |||| | |||||||| ||
Sbjct 3142 GCTAATGTTCTTCCATCTTCTAATTGTTTACCTGCAAATATTAATCTTTGTTGATCAGGT 3083
Query 101129 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT 101188
|| | |||||||| || ||||||| ||| |||| | | | || | | |||
Sbjct 3082 GGAATACCTTCTTTATCTTGAATTTTTGCTTTTACATTTTCAATTGAATCAGATG--GTT 3025
Query 101189 --GTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238
||| | || |||||||| || || |||||||||| ||||||||||||
Sbjct 3024 CAACTTCCAATGTTATAGTTTTACCTGTTAATGTTTTAACAAAAATTTGCAT 2973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 409652796636177
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |