Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq41 127 4e-24
>seq41
Length=3466
Score = 127 bits (140), Expect = 4e-24
Identities = 156/212 (74%), Gaps = 1/212 (0%)
Strand=Plus/Minus
Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955
|||||| || ||||||||||| || || || || || | || | ||||| |||| |||
Sbjct 3176 ATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTG 3117
Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015
||| || ||||| || || | |||||| ||| |||||||| || || ||||| || ||
Sbjct 3116 TTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTT 3057
Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075
||||||||| | || || | || || | ||| ||||| | || || || ||||| ||
Sbjct 3056 TGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGT 2997
Query 283076 CAAAGTCTTAACGAATATCTGCAT-TTTCATA 283106
|| || ||||| || || ||||| ||| |||
Sbjct 2996 TAATGTTTTAACAAAAATTTGCATCTTTAATA 2965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046717701612362
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |