Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq41 127 4e-24 >seq41 Length=3466 Score = 127 bits (140), Expect = 4e-24 Identities = 156/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| || ||||||||||| || || || || || | || | ||||| |||| ||| Sbjct 3176 ATGTAAAGTACTTTCTTTTTGAATATTATAATCTGCTAATGTTCTTCCATCTTCTAATTG 3117 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || ||||| || || | |||||| ||| |||||||| || || ||||| || || Sbjct 3116 TTTACCTGCAAATATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTATCTTGAATTTT 3057 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||||||| | || || | || || | ||| ||||| | || || || ||||| || Sbjct 3056 TGCTTTTACATTTTCAATTGAATCAGATGGTTCAACTTCCAATGTTATAGTTTTACCTGT 2997 Query 283076 CAAAGTCTTAACGAATATCTGCAT-TTTCATA 283106 || || ||||| || || ||||| ||| ||| Sbjct 2996 TAATGTTTTAACAAAAATTTGCATCTTTAATA 2965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046717701612362