Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11- 05] 1,603 sequences; 5,248,409 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq495 255 6e-63 >seq495 Length=2372 Score = 255 bits (282), Expect = 6e-63 Identities = 610/914 (67%), Gaps = 19/914 (2%) Strand=Plus/Plus Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276 |||||||||||| |||||| | || ||||| || || ||||| | |||||| ||||| Sbjct 277 TTTTTGATATTCAGATACACGTTTCTCAAAAAAGTTGGTTTTACCTTGTAATGAAATATT 336 Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAA 23336 |||||| ||||||||||| || |||||||| || |||||| || || | ||| Sbjct 337 TTCCATGAAATCAAATGGGTTGTTCGTATTATAAACTTTTTTACAATCAAAATCTTGTAA 396 Query 23337 AAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAG 23396 | | ||||||||| ||||| | ||||| ||||| ||| | | || |||||||| || Sbjct 397 GATGCCATCTGCTACGAATTCTACATATTTGCACATGGAATTACAATTCATACCTATAAG 456 Query 23397 TTTTACTGGAATCGCATCATATAAGAATAGT--TTTTCAATGGAAACAGCATCTTTAATT 23454 | || || | | | ||| ||| || | | || || || || || || | | Sbjct 457 TGAGACAGGCAATGAAACAT-TAACAA-ACTCCTTCTCTATTTCTACTGCTTCCATCACA 514 Query 23455 ATTTGAACAATAACTTCTTCACT-AGGTGGATATTTTAAATACTTAAAC--AATAAACAT 23511 ||||| | | |||| | | | | |||||| || | | | | |||| Sbjct 515 ATTTGTTTGACTATCTCTTTATTTACCT---TATTTTTAAGATATGAGTGTATTAAAACG 571 Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571 ||||| | |||||| ||| ||||| | || | ||||| |||||||| | || Sbjct 572 GCAAATTTGTAATGTAAGCCCTCATCTCGTGATATGAGCTCATTTGAAAATGTCAGACCA 631 Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631 ||||| |||| ||| || | ||| || || | ||||| || ||| || |||| | Sbjct 632 GGCATCTTGCCTCTTTTCTTTAACCAGAAGATGGATGCAAAGGAAGAGGAGAAAAAAAGA 691 Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691 || || ||| ||||| || | | | || | | | || | ||| ||| Sbjct 692 CCTTCTACACATGCAAATGCTATCAATCTGATAGAATAGTCCTCTTTTGAGTCA---ATC 748 Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACAC---ACTCAATTGTTTCAATTGCTTTT 23748 ||||| |||||||||||| ||| || | ||| ||| ||||| || Sbjct 749 CATTTGAAACACCAATTAGCCTT---TTTCTCAATTGATGGAATATTTTTGATTGCGTTA 805 Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 || ||||| ||||| ||| |||||| | ||||| || ||||||| ||| ||||| Sbjct 806 AACAGAAAGTGTTTTTGTTCGTTATCTTTAATATAAGTGTCAATTAACAAAGAGTACATC 865 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868 |||||||| || ||||| || |||||| || || ||||||||| | ||||| | Sbjct 866 TCAGAATGGATGTTTTCTATCATAATCTGGAATCCGTAAAAACATTTTGCTTCTTTAAGC 925 Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928 |||| || | ||||||||| ||||||||| || || || || ||||| ||||| Sbjct 926 TGAATTTCTCTTGAAAATCTTTCTAATAAATTTTCATTTACGATTCCGTCACTTGCAGCG 985 Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988 || || |||||||||| | ||| |||| | ||| | ||| || ||||| Sbjct 986 AAAAATGCAAGAACATTTGATATGAAATATTGCTCACTTTCTTTTAAAGAATTAAAATCA 1045 Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048 || | ||| ||| | ||||||||| ||||||||||| ||| | | ||| ||||| Sbjct 1046 TTCAAATCACGTGAAAGATCAACTTCTTCAACTGTCCAGAAAGAGGAAACCGCATGCTTA 1105 Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATCAGATGATTCT 24108 |||||| |||||||||||| |||| ||||||||| | ||| ||| || |||| Sbjct 1106 TACATTTGCCAAATATCATGGTGTTCTATTGGAAAAAGAGTGAACTTATTGTCTGGTTCT 1165 Query 24109 TTAAGAATATATTC 24122 | ||||||||||| Sbjct 1166 GTTAGAATATATTC 1179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521477550684200