Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoloma_20neurophilia_20[genbank_20GCA_5F001432165.1_202015-11-
05] 1,603 sequences; 5,248,409 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq495 255 6e-63
>seq495
Length=2372
Score = 255 bits (282), Expect = 6e-63
Identities = 610/914 (67%), Gaps = 19/914 (2%)
Strand=Plus/Plus
Query 23217 TTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATT 23276
|||||||||||| |||||| | || ||||| || || ||||| | |||||| |||||
Sbjct 277 TTTTTGATATTCAGATACACGTTTCTCAAAAAAGTTGGTTTTACCTTGTAATGAAATATT 336
Query 23277 TTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGATAATTCCTTTAA 23336
|||||| ||||||||||| || |||||||| || |||||| || || | |||
Sbjct 337 TTCCATGAAATCAAATGGGTTGTTCGTATTATAAACTTTTTTACAATCAAAATCTTGTAA 396
Query 23337 AAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATTAG 23396
| | ||||||||| ||||| | ||||| ||||| ||| | | || |||||||| ||
Sbjct 397 GATGCCATCTGCTACGAATTCTACATATTTGCACATGGAATTACAATTCATACCTATAAG 456
Query 23397 TTTTACTGGAATCGCATCATATAAGAATAGT--TTTTCAATGGAAACAGCATCTTTAATT 23454
| || || | | | ||| ||| || | | || || || || || || | |
Sbjct 457 TGAGACAGGCAATGAAACAT-TAACAA-ACTCCTTCTCTATTTCTACTGCTTCCATCACA 514
Query 23455 ATTTGAACAATAACTTCTTCACT-AGGTGGATATTTTAAATACTTAAAC--AATAAACAT 23511
||||| | | |||| | | | | |||||| || | | | | ||||
Sbjct 515 ATTTGTTTGACTATCTCTTTATTTACCT---TATTTTTAAGATATGAGTGTATTAAAACG 571
Query 23512 GCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCT 23571
||||| | |||||| ||| ||||| | || | ||||| |||||||| | ||
Sbjct 572 GCAAATTTGTAATGTAAGCCCTCATCTCGTGATATGAGCTCATTTGAAAATGTCAGACCA 631
Query 23572 GGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATA 23631
||||| |||| ||| || | ||| || || | ||||| || ||| || |||| |
Sbjct 632 GGCATCTTGCCTCTTTTCTTTAACCAGAAGATGGATGCAAAGGAAGAGGAGAAAAAAAGA 691
Query 23632 CCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATC 23691
|| || ||| ||||| || | | | || | | | || | ||| |||
Sbjct 692 CCTTCTACACATGCAAATGCTATCAATCTGATAGAATAGTCCTCTTTTGAGTCA---ATC 748
Query 23692 CAtttttttGTCCAATTAGCCTTCAATTTTACAC---ACTCAATTGTTTCAATTGCTTTT 23748
||||| |||||||||||| ||| || | ||| ||| ||||| ||
Sbjct 749 CATTTGAAACACCAATTAGCCTT---TTTCTCAATTGATGGAATATTTTTGATTGCGTTA 805
Query 23749 AAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808
|| ||||| ||||| ||| |||||| | ||||| || ||||||| ||| |||||
Sbjct 806 AACAGAAAGTGTTTTTGTTCGTTATCTTTAATATAAGTGTCAATTAACAAAGAGTACATC 865
Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACAAT 23868
|||||||| || ||||| || |||||| || || ||||||||| | ||||| |
Sbjct 866 TCAGAATGGATGTTTTCTATCATAATCTGGAATCCGTAAAAACATTTTGCTTCTTTAAGC 925
Query 23869 TGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCA 23928
|||| || | ||||||||| ||||||||| || || || || ||||| |||||
Sbjct 926 TGAATTTCTCTTGAAAATCTTTCTAATAAATTTTCATTTACGATTCCGTCACTTGCAGCG 985
Query 23929 AAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCA 23988
|| || |||||||||| | ||| |||| | ||| | ||| || |||||
Sbjct 986 AAAAATGCAAGAACATTTGATATGAAATATTGCTCACTTTCTTTTAAAGAATTAAAATCA 1045
Query 23989 TTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTA 24048
|| | ||| ||| | ||||||||| ||||||||||| ||| | | ||| |||||
Sbjct 1046 TTCAAATCACGTGAAAGATCAACTTCTTCAACTGTCCAGAAAGAGGAAACCGCATGCTTA 1105
Query 24049 TACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCTATCAGATGATTCT 24108
|||||| |||||||||||| |||| ||||||||| | ||| ||| || ||||
Sbjct 1106 TACATTTGCCAAATATCATGGTGTTCTATTGGAAAAAGAGTGAACTTATTGTCTGGTTCT 1165
Query 24109 TTAAGAATATATTC 24122
| |||||||||||
Sbjct 1166 GTTAGAATATATTC 1179
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521477550684200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |