Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887935.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq367 100 2e-16 >seq367 Length=8762 Score = 100 bits (110), Expect = 2e-16 Identities = 121/162 (75%), Gaps = 2/162 (1%) Strand=Plus/Minus Query 12796 GGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCTTTAGTGAAAGGCATG 12855 ||||| ||||||||||| || || | ||| |||| | || ||||| || || ||||| Sbjct 7848 GGAAATGCATGTGGGTTCATAATCACATCTGGTATCAATCCTTCTTTGGTAAATGGCATT 7789 Query 12856 TTTTCTTGGGCATAAA-TCATACCACAGGTACCTTTTTGTGCGGTAAAAGAAGCAAATTT 12914 | |||||| | ||| |||| || ||||||||| ||| | |||||||||||| Sbjct 7788 TCTTCTTGT-CTTAATGTCATTCCTATGGTACCTTTCTGTCCATGTCGAGAAGCAAATTT 7730 Query 12915 ATCTCCTATTTCAGGTATTTTTGGAGATCGTAATTTAATTTT 12956 ||||||||||| ||||||| | ||||||| ||| ||||| Sbjct 7729 ATCTCCTATTTGAGGTATTCTGCATGATCGTACTTTTATTTT 7688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328363239241060