Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887935.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq157 125 2e-23 >seq157 Length=84007 Score = 125 bits (138), Expect = 2e-23 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984 ||| | ||| | ||||| || || ||||| || ||||||||||| | ||||| || Sbjct 52132 TCTAAGAACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAATCACTCAATGTTCTACC 52073 Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 |||||| | || |||||||| || || | || |||||| |||||||| || ||||| || Sbjct 52072 ATCTTCCAATTGTTTACCTGCAAATATCAATCTTTGTTGATCTGGAGGTATTCCTTCCTT 52013 Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104 |||||| |||||| ||||| || || |||| ||| | ||| ||||| || || | Sbjct 52012 GTCTTGTATTTTTGCTTTGACATTTTCTATGGAGTCGGTGGATTCGACTTCTAGTGTGAT 51953 Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 ||||| || || | ||||| || || | |||||| Sbjct 51952 TGTCTTGCCCGTAAGCGTTTTGACAAATATCTGCATT 51916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109476056059130