Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887935.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq157 98.7 7e-16 >seq157 Length=84007 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || ||||| | | |||||||| || || ||||| || || |||||||| Sbjct 52143 CCTCCCCTCAATCTAAGAACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAATCACTC 52084 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| | | || ||||||||||| || ||||| ||||| | || |||||| | || Sbjct 52083 AATGTTCTACCATCTTCCAATTGTTTACCTGCAAATATCAATCTTTGTTGATCTGGAGGT 52024 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||||| || || |||| || | || |||| | ||||| || Sbjct 52023 ATTCCTTCCTTGTCTTGTATTTT-TGCTTTGACATTTTCTATGGAGTCGGTGGATTCGAC 51965 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || || || || | |||||| ||||| |||||||| Sbjct 51964 TTCTAGTGTGATTGTCTTGCCCGTAAGCGTTTTGACAAATATCTGCAT 51917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328702437628800