Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887935.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq24 82.4 8e-11 >seq24 Length=118493 Score = 82.4 bits (90), Expect = 8e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 74751 GCAAACTCCTGATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCA 74810 ||||| || |||| ||||||||||| || || |||||||| || || | ||| || Sbjct 56018 GCAAATTCAACATGCACTCCTTCATCTCTACTGATTAATTCATTGGAGAAAGTAAGACCT 56077 Query 74811 GGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATG 74870 ||||| | |||||| || || | ||| || |||| || || ||| |||||| || Sbjct 56078 GGCATTAATCCACGTTTTTTAAGCCAGAATATGGATGCAAAAGATCCAGAGAAGAAAATA 56137 Query 74871 CCTTCGACACACGCAAAGGC 74890 ||||| || |||||||| || Sbjct 56138 CCTTCTACGCACGCAAATGC 56157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547213332322000