Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spraguea_20lophii_20[genbank_20GCA_5F001887945.1_202016-12-01]
390 sequences; 5,764,773 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq24 118 1e-21
>seq24
Length=118493
Score = 118 bits (130), Expect = 1e-21
Identities = 325/486 (67%), Gaps = 18/486 (4%)
Strand=Plus/Minus
Query 101816 TTGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTCTAAATGA 101875
||||||||||||||| |||||| | || || ||||| ||||||||||| ||| |||||
Sbjct 56533 TTGGACTGCTGAAGAAGTAGATTTATCTAATGATTTAGACGATTGGAATGGTCTTAATGA 56474
Query 101876 AAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATTGT 101935
|||||| | || |||| || | ||||||| ||||| | || ||||| |||||
Sbjct 56473 TGATGAAAGACATTTTATAAGTTATGTGTTGGCATTTTTTGCAGCATCAGATGGGATTGT 56414
Query 101936 TTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATCTT 101994
| ||| ||| | | || ||||| | || || || || | | ||||| |||| |
Sbjct 56413 TAATGAAAATCTTTTAGAAAATTTTGCAGCGGAAGTTCAGATAC-CAGAAGCTAGATGTG 56355
Query 101995 TCTATGCGTATCAATGTCATAAT-GAAATGGTGCATGGGGAGACATACAGTAAACTCATA 102053
| |||| | || | | || || |||| | ||| |||| ||| || |||
Sbjct 56354 TTTATG-GATTCCAAATAATGATAGAAAATATACATTCTGAGATGTACTCATTGCTAATA 56296
Query 102054 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCA---GCTCTTTGAAGCCATCCAAACA 102110
|| | ||||||| || | ||||| || | | ||| | || || |||
Sbjct 56295 GAAACATATATTA--GA-GAACAAGAGAAAAAAGATTTTTTATTTAACGCAATTTCTACA 56239
Query 102111 GTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAAGTCG 102167
| ||| ||| |||| ||||| || ||| ||||||| ||| | |||| ||| ||
Sbjct 56238 ATACCAACAATTAAAAATAAAGCAGACTGGACTATGAAATGGATAACGGATAAAAAATCA 56179
Query 102168 CGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGT 102227
|| |||||| || | | ||||||||||| || || ||||| |||||||||||
Sbjct 56178 TGT---TTTGCTACAAGAATAATTGCATTTGCGTGCGTAGAAGGTATTTTCTTCTCTGGA 56122
Query 102228 TCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286
| ||| ||| | || | ||||| || || || || | ||||||||||| |||||
Sbjct 56121 T-CTTTTGCATCCATATTCTGGCTTAAAAAACGTGGATTAATGCCAGGTCTTACTTTCTC 56063
Query 102287 CAACGA 102292
||| ||
Sbjct 56062 CAATGA 56057
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620739373880800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |