Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887945.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_019526.1 Length=345809 Score E Sequences producing significant alignments: (Bits) Value seq390 87.8 4e-12 >seq390 Length=4512 Score = 87.8 bits (96), Expect = 4e-12 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 38307 GATATGGCTCTTCAACCATGTCATAGTTTTGTTCAATGGGTAGTTAGTGATAATAAACTA 38366 || |||||||||| |||||||||| |||| |||||| || |||||||||| || Sbjct 81 GAAATGGCTCTTCCACCATGTCATTGTTTATTTCAATTTTATGTCGCTGATAATAAATTA 140 Query 38367 AGTTGTATTCTTACCCAACGCTCAGCAGATACATTCTTGGGAGTTCCACTGAATATCACA 38426 |||||| || | ||| | || | |||| |||||||| || | ||||| | Sbjct 141 AGTTGTCTTTTATATCAAAGATCCGGTGATATGGGATTGGGAGTACCTTTTAATATTGCT 200 Query 38427 TCATATTCAGTACTCACTCATATGATAGCACAAATTACTGGATTAGAAGTTGGTGAATTT 38486 |||||| | || || ||| | ||| || |||||||||||||| ||||||||| Sbjct 201 AGTTATTCACTTCTTGCTTTAATGGTGGCAAAAGTTACTGGATTAGAACCAGGTGAATTT 260 Query 38487 ATC 38489 ||| Sbjct 261 ATC 263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1106452071169680