Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887945.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq370 174 1e-37 seq35 165 5e-35 seq246 163 2e-34 seq24 131 1e-24 seq367 123 2e-22 seq168 107 1e-17 seq301 95.1 8e-14 seq112 95.1 8e-14 seq157 93.3 3e-13 seq46 87.8 1e-11 >seq370 Length=149473 Score = 174 bits (192), Expect = 1e-37 Identities = 928/1466 (63%), Gaps = 61/1466 (4%) Strand=Plus/Minus Query 591599 ATAAATATATTCATACTTTGTGTTTGATCTATAAATGGAGCTCGATCAGCTGCCATATCA 591658 ||||| ||||| | | ||||| |||||| | | |||| | || |||||| || | ||| Sbjct 55946 ATAAAAATATTAAGAGATTGTGATTGATCAACATATGGTGTTCTATCAGCAGCTAAATCT 55887 Query 591659 ATGATAGATTGTTGTGGAATTTCCCAAACTGTTCTATAAATATTTTTAATATTTTGTGGT 591718 | ||||||| | | |||||| |||||||||| | || |||||| | || |||| Sbjct 55886 AAAATAGATTTCATTTTTAATTCCCATGCTGTTCTATACAAATATTTAATTTCTTTTGGT 55827 Query 591719 ATATTNNNNNNNNNTGCTATGGATCCTTGATAATATTTTATAAGATCCACCATATCTGAA 591778 ||| | || || || | | | || || | || ||| | Sbjct 55826 ATAGCTTCTATATCTTGGATAGAACCATCGTTCTGAACTACTAGGTTTTTTATTTCTTTA 55767 Query 591779 TTCCATAAACCGAGTTCCATTAAATCTTTAATTAGATATTTGTTAATGACATAATAATCT 591838 ||||| | | |||| | |||||||||||||| ||| || | || | | ||||| Sbjct 55766 TTCCAGAGATTAAGTTTTAGTAAATCTTTAATTAAATAAGAATTTACAACTTGAAAATCT 55707 Query 591839 CCTGCTAAAGTACTTCTTGAATAAATATTTTCGGTAAATGGTTCAATACATTCATTATAT 591898 || |||||||| ||||| | |||||||||| || || ||||| |||||||||||| | Sbjct 55706 CCAGCTAAAGTTCTTCTGGTATAAATATTTGAAGTTAAAGGTTCTATACATTCATTAAAA 55647 Query 591899 CCTTTAATTTGAGATGTACTTGCTGTTGGCATACATGTAGTAGTTAAACTGTTTCTAACA 591958 || |||||| |||||| |||||| |||||| | | | ||| |||||||| Sbjct 55646 CCCAAAATTTGGGATGTAGATGCTGTAGGCATAACAGCAACAAATAATGAATTTCTAACT 55587 Query 591959 CCATATATCATTATCTGTTCCCGAAGAGTTTTCCAATCCCACATTCCACTTAATTTATCT 592018 |||| | | || | ||| | | | | | |||||| |||| |||| Sbjct 55586 CCATGCTTTTTGATTTTTTCTCTCAAAATATCCCAATC------------TAATAAATCT 55539 Query 592019 -TCACCAAGATTCCAT--AAATCAAACTGGAATTTACCTTTTGAAAGTGGACTTCCCCAA 592075 | | || || | |||||| || ||| ||| | | |||| |||| | Sbjct 55538 GTTGGGGTGGTTTTATACATATCAAAATGTAATAGACCCTGACTCAATGGAGATCCCTCA 55479 Query 592076 AAGGTTTCATATGGACCAGATTCTTTGGCCATTT--GTA-ATGATTCTGTCATTGTTCCA 592132 | ||||| || | |||| | || || | || ||| |||||| || || | Sbjct 55478 TATGTTTCGTAAGTACCATACCGTTCTGCTAATTCAGTACTTGATTC---CAATGCAGAA 55422 Query 592133 AAATATATAGTTTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAATGGA 592192 |||| |||||||| || |||| | |||| | || ||| ||| ||||||||| Sbjct 55421 TAATAAATAGTTTCGAAAATTTGCTTATTTAATAATCTAGCTTCTTCACTATCAAATGGC 55362 Query 592193 ATTTTAAATATAGCAAACACATCGGCTAATCCTTGTACACCAACGCCAATAGGTCTATGG 592252 ||| | | ||| ||| ||||||||||||||||| ||||||| || ||||||||||| Sbjct 55361 ATTCTTAGAATAATAAATACATCGGCTAATCCTTGAACACCAATACCCATAGGTCTATGT 55302 Query 592253 CGTAAATTTGAAACACGT----GTTTTTTCTACTGGATAATAATTTACATCAATAATATT 592308 | | ||| || | |||| |||||||||||| | || || || | | Sbjct 55301 CTCATATT----ACTTTTTTTAGTTTCTTCTACTGGATATTTTGTTCTGTCTATTACCCT 55246 Query 592309 ATTTAAATTTCTTGTAATAATTCTTGCGACCTTGTACAATTTATTATAATCAAACTCTGG 592368 || |||||| || || || | || | | || | | ||| | ||||||| | Sbjct 55245 ATCCAAATTTTTTACAAGAACTTTTACTATCTCTTTTAGTTTTATGAAATCAAATT---- 55190 Query 592369 AACACCGTTTTCATGAATAATAAATTTAGGTAAACAAATTGATGACAAATTACAAACTGC 592428 ||| || | |||| || | || | || ||||||| ||||||||||| || Sbjct 55189 -----TGTTATCTT---TAATGAAAGTTGGAAGACCTATTGATGCTAAATTACAAACAGC 55138 Query 592429 ATATTCATCTGCAGATGAG--AATTCTACAATTTCACAACAAAGATTTGAGCCATTAATT 592486 |||||| | | | || | ||| || ||||| ||||||||| || | || || Sbjct 55137 TATTTCATCAG--GCTTAGTTACTTCAACTATTTCTGCACAAAGATTAGAACATTTTATA 55080 Query 592487 ACGCCTATATTAATCTGATTTGATTTTTGATTGATAGCATCTTTAAACAATATGTATGGT 592546 || ||||| |||| || || | | ||| | ||||||| | | |||| | || Sbjct 55079 GATCCAATATTTTTCTGGTTAGAATATCTATTACACGTATCTTTATAAATTATGAAAGGA 55020 Query 592547 ACACCTGTTTCAATTTGTGTTTCCATTATTTTAAACCATAAATCTCTTGCTTTGATTTGT 592606 ||||||||| ||||||||||| ||||| | ||| | || | ||||| | | Sbjct 55019 TTACCTGTTTCTATTTGTGTTTCAATTATCGTTTTCCAAAGATGTTGAGCTTTTACAGTT 54960 Query 592607 TTTATAAATCTACCCTCAT-TTTCATATTTAAGATAAGCTTTATTAAATTCTTCACCATA 592665 |||| | | ||| | |||||||| |||| ||| ||| |||||| | Sbjct 54959 CTTAT-TGCCAATCCTTTTGCTTCATATTCTTCATAAAGTTTTACAAACTCTTCATTGTG 54901 Query 592666 TTT-TCCTACAATATCTGGACATTGTGAT--GGACACATAAGTGACCAATTTTCATCTTT 592722 ||| ||| | || ||| || ||| || | | | | ||||||||||| || || || Sbjct 54900 TTTCTCCCATAA-ATCAGG-TGCTGT-ATCCGCAGAAAAAAGTGACCAATCTTTATTTTC 54844 Query 592723 TTCAACACGATCCATGAAAATAT-TATTAATCATTAATCCAAGGAATAAATCTCTGGCTC 592781 ||| || | | |||||| | || | || || | ||| | ||||||||||| | || Sbjct 54843 TTCGACTCTTTTCATGAATAAATCTGGTACCCA-AAGTCCTAAAAATAAATCTCTTGTTC 54785 Query 592782 TTTCCGTTTCAGCACCAGTATTTTTCTTTAGATCAAGGAAGAAAAATATATCACCATGCC 592841 || | || ||| ||| || ||| || | || | | || || |||||| Sbjct 54784 TTACTTCGTCTTTTCCAACATTCTTTCTTAATTCTAAAAATTCATAGATTTCTACATGCC 54725 Query 592842 AAGGTTCAATAAATACCGCAAATGAACCAGCTC---TTTTACCACCTTGATTCGCATATC 592898 | ||||| || |||| || | || ||||| || |||| || |||||||| |||| Sbjct 54724 ATGGTTCTATGTATACTGCCATTGCACCAGGTCTCTTTTTTCCTCCTTGATTTACATACT 54665 Query 592899 TGGCTATGTCAT--TATATATTGATAATACTCTCAA-TCCGTTAGATGTACCTTGAGTAG 592955 | | | | | | || | || | ||| ||| |||| ||| | || |||| Sbjct 54664 TTGTTGTTGCTTCAAATGTTTTAAGCATAGGTACAACTCCGAGTGATCTTCCACCTGTAG 54605 Query 592956 AACTAATATAAGCTCCTTCAACCCGAACATTAGACATATTAATACCTATACCTCCCGCAA 593015 | | || || ||||| | | |||||| |||||||| |||| |||||| ||| Sbjct 54604 ATTTTATTGTAGATCCTTTTGCTCTCACATTATGAATATTAATTCCTAGACCTCCTGCAC 54545 Query 593016 ATTTACTAATAACAGCACAATCTTTC 593041 |||| |||| |||||| | |||| Sbjct 54544 TTTTAGATATAAGAGCACAGTTTTTC 54519 >seq35 Length=118308 Score = 165 bits (182), Expect = 5e-35 Identities = 244/341 (72%), Gaps = 21/341 (6%) Strand=Plus/Plus Query 297322 GTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCATTATCCTTTT 297381 ||||||||||||||||||||| |||||||||||||||| |||| |||||||| ||| Sbjct 106844 GTTTTAGATTGTTGGTTTGAAAGTGGTTCTATGCCTTATGCACAAAACCATTATCCATTT 106903 Query 297382 GAAAATTCCGA-AATTTTAGACACTTCACAAGATTATATTGCAGATTTTATAACAGAATC 297440 | | || ||| ||| ||| || || |||||||||||| |||| Sbjct 106904 TCCACT---GATAATCTTAAACA--TC-CA----------GCAGATTTTATAGGAGAAGG 106947 Query 297441 AATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACAGCTATATTTAA 297500 | |||||||||| ||||| |||||||||||||| || ||||||| | ||| || Sbjct 106948 AGTTGATCAAACCAGAGGATGGTTTTATACTTTGCATGTAATTTCTACTCTTTTATACAA 107007 Query 297501 CAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTTAACGCAGCTGATGGACAAAA 297560 ||||| |||||||||||||| ||||| | |||||||| |||| |||||| | || Sbjct 107008 TAAACCGGCATTTAAAAATGTTATTGTCAATGGAATTGTCTTAGCAGAAGATGGAAAGAA 107067 Query 297561 AAT--GTCAAAAAGTAAAGGTAATTATCCTGATCCAAATATTTTGATGGATAAATATGGT 297618 || || ||| | |||| ||||| || ||||| | || | || | ||||||||| Sbjct 107068 GATGAGTAAAAGATTAAA--AAATTACCCAGATCCTATGGTTGTCGTGAACAAATATGGT 107125 Query 297619 GCAGATACTTTACGTCTTTATTTATTATCAACACCTGTAGT 297659 || ||| | || | | ||| | |||||| | ||||| || Sbjct 107126 GCTGATTCATTGAGATTCTATCTTTTATCATCGCCTGTGGT 107166 >seq246 Length=60991 Score = 163 bits (180), Expect = 2e-34 Identities = 284/406 (70%), Gaps = 9/406 (2%) Strand=Plus/Minus Query 356211 TTGGATAAATCCTTCATATTTAGC-TAATGAAGGCCAAAAACGATGAATTAAATTCATTA 356269 ||| | ||||||| ||||| | ||||||||| || || || || ||||| || | Sbjct 12099 TTGAAGAAATCCTGG-TATTTTGAGTAATGAAGGAAAATAAAAATCAAAGAAATTAATCA 12041 Query 356270 TTAATCCTTTAATATGATATCCATCAACGTCTTGATCTGCTAAAATCATAATACTACCAT 356329 |||||||| ||||| | |||||| |||||||| | | ||| |||||| |||| Sbjct 12040 ACAATCCTTTGATATGGGAACCATCATGATCTTGATCCGTCATAATTATAATATGCCCAT 11981 Query 356330 ACCTAAGTTCTTTAAGATCATTATATACTTTTCCTTGCTCTAAACCAACAAttttttttA 356389 | || | ||||| | ||| || ||| |||| ||||| | ||| || | |||||||| | Sbjct 11980 ATCTTAAATCTTTTACATCTTTGTATTCTTTACCTTGTTTTAATCCTATTATTTTTTTAA 11921 Query 356390 TAGCAGTTATTTCTTCATTACTTGCGACAAT-TGCTGGACTTTTGGTTCT--TACATTTA 356446 || |||| ||| ||| || | | ||| || | | | |||| |||||||| Sbjct 11920 TAT---TTATCAATTCTTTATTTTCCATAATCTGTTTGTGAGAAGCTTCTCGTACATTTA 11864 Query 356447 GTGGTTTTCCTTTTAATGGGAAAATACCATAATAATCTCTTCCGACAACATTTAATCCAG 356506 |||| ||||| || || || | |||||||| |||| |||| |||| | || || | Sbjct 11863 AAAGTTTACCTTTCAAAGGAAATACACCATAATGATCTTTTCCTACAAGACCTATACCTG 11804 Query 356507 ACATAGCAAATGCTTTAGCTGAATCTCCTTCAGTAAGAATTAAAGTACATTTATATCCTT 356566 ||||| |||||| ||||||||||||||||| || | |||||||| ||||| || | Sbjct 11803 ACATAACAAATGTCTTAGCTGAATCTCCTTCTGTTAAAATTAAAGAGCATTTGTAAGAAT 11744 Query 356567 CTTTTGTTCCAGCTTTATGAGCATTATATAATTTCTC-ATATCTAA 356611 | ||||| ||| | | ||||| | ||| || || ||||| || Sbjct 11743 CAACAGTTCCTGCTCTGTTAGCATCTTCTAACTTTTCAATATCCAA 11698 Score = 109 bits (120), Expect = 4e-18 Identities = 278/417 (67%), Gaps = 6/417 (1%) Strand=Plus/Minus Query 357274 TTAATATTTGTTACTTTTGGTTTTTCTTTGTTATACATATTATCAGTAAATTTTTGATAA 357333 || |||||| ||| ||| | ||| | ||| |||||| | |||||| | |||||| Sbjct 11036 TTCATATTTTTTATCACTGGATCTTCCCTCTTACTCATATTCTTTGTAAATCTCTGATAA 10977 Query 357334 AACT-TCTTTCCTCGTTTTGTGTCAACAGTTTCAATATGAAATTCAGTGGAATATATATT 357392 | | | || ||| |||| | || ||||| |||| | |||||| | | ||||| Sbjct 10976 TAATATAATTTCTCCTTTT-TATCTACAGTCTCAACAACAAATTCCTCACTAAAAATATT 10918 Query 357393 AGCTAATTTAGAACCAAAACCATTTTTACCACCCACTGTTTTCTTTTCGTTTTTATCATA 357452 | | ||||| |||| | |||||| | ||||| ||||| || | | |||||| Sbjct 10917 ACAAAGTTTAGCACCATATCCATTTCTTCCACCAGTAACCTTCTTCTCATCATCATCATA 10858 Query 357453 ATTAGTTGATGTCAAAAGTTCTCCAAAAATCATAGATGGTACTAAAATTTTATGCTCTTT 357512 ||||| || || | | |||||||||| || || | ||||| | || | Sbjct 10857 ATTAGAACTGGTTAACAACTGCCCAAAAATCAATTCAGGAACATATATTTTCTCCTTTGC 10798 Query 357513 ATGTTCAACCACATCAATACCATCACCATTATTCCAGACAGTAATCTTACCTGTATCTTG 357572 |||| |||| |||||||| |||||||| | |||| || ||| | | | Sbjct 10797 ATGTATTTTCACAGGTATACCATCTCCATTATTATAAACAGATATGACACCATTCTTCTC 10738 Query 357573 TTCTATATTAACTTTTATTGTATTACATGT--CGAACACCTATTATTATGATCTGCTGCG 357630 || |||| ||||| || ||| ||| | | | | | |||| |||| ||||||||| Sbjct 10737 ATCAATATCCACTTTAATACAATT-CATTTTACTATCTCTTATT-TTATTATCTGCTGCA 10680 Query 357631 TTAACTAATACTTCATCATAAATTTTATATAAACCAGGTACATATGTTATCTCTTTA 357687 ||||| | || ||||||| | ||||||||||||||||| ||| | || || | |||| Sbjct 10679 TTAACAATTATTTCATCAAATATTTTATATAAACCAGGAACAAAAGTAATATTTTTA 10623 >seq24 Length=118493 Score = 131 bits (144), Expect = 1e-24 Identities = 435/665 (65%), Gaps = 34/665 (5%) Strand=Plus/Minus Query 594353 TTGGGTTGTTGAGGAAGTTGATCTTTCTAAAGATGTTTCAGATTGGAATAATTTACTGAG 594412 |||| || ||| ||||| ||| | ||||| ||| | ||||||||| | || | Sbjct 56533 TTGGACTGCTGAAGAAGTAGATTTATCTAATGATTTAGACGATTGGAATGGT---CTTAA 56477 Query 594413 TGAAAATGACAGAATATTTATTATGCATGTACTTGCATTTTTTGCATCAGCAGATGGTAT 594472 ||| |||| ||| ||||| | |||| | |||||||||||| || ||||||| || Sbjct 56476 TGATGATGAAAGACATTTTATAAGTTATGTGTTGGCATTTTTTGCAGCATCAGATGGGAT 56417 Query 594473 TGTAAATGCAAATATAAAAGAAAATTTAATTGATGTTGTTAAAATTAAAGAAGCAGAATG 594532 ||| |||| |||| | ||||||||| | | ||| | || |||||| ||| Sbjct 56416 TGTTAATGAAAATCTTTTAGAAAATTTTGCAGCGGAAGTTCAGATACCAGAAGCTAGATG 56357 Query 594533 TGCATATGGTAAACAATTTGAAATGGAAAATGCACATGGAGAAATGTATTCATTGATGTT 594592 || ||||| ||| | || |||||| |||| || ||||| |||||| | | Sbjct 56356 TGTTTATGGATTCCAAATAATGATAGAAAATATACATTCTGAGATGTACTCATTGCTAAT 56297 Query 594593 AGATACAT---TTGTAAAAGATGATATACTTAAGGATAAATTAATTAAAGCCATAAAAAC 594649 ||| |||| || | || | || | | || ||| ||| |||| || || || Sbjct 56296 AGAAACATATATTAGAGAACAAGAGAAA---AAAGATTTTTTATTTAACGCAATTTCTAC 56240 Query 594650 TATGCCAAGTATTaaaaaaaaaGCAGATTGGTGTAAAAAATGGATTAAATCTGATAAAA- 594708 || |||| |||||||| |||||||| ||| || |||||||| | | ||||||| Sbjct 56239 AATACCAACAATTAAAAATAAAGCAGACTGGACTATGAAATGGAT---AACGGATAAAAA 56183 Query 594709 -----CTTATGC-ACATAAATTAGTTGCATTTGCTATTGTTGAAGGTGTATTTTTTAGTG 594762 || ||| ||| | | || |||||||||| || |||||| | || || || Sbjct 56182 ATCATGTTTTGCTACA-AGAATAATTGCATTTGCGTGCGTAGAAGGTATTTTCTTCTCTG 56124 Query 594763 GATCATTCGCGTCGATATTCTGG-TTAAAAACAAGACAAGGTAATGTTATGCCTGGGTTA 594821 |||| || || || ||||||||| ||||||| || || || | ||||| || | Sbjct 56123 GATCTTTTGCATCCATATTCTGGCTTAAAAA----ACGTGG--AT-TAATGCCAGGTCTT 56071 Query 594822 ATTAAATCAAATAAATTTATTGCACGAGATGAAAATAAACATGTTGAATTAGCA--TCCA 594879 | | || ||| |||| || |||||||| ||||||||||| ||| || Sbjct 56070 ACTTTCTCCAATGAATTAATCAGTAGAGATGAAGGAGTGCATGTTGAATTTGCATGTCTC 56011 Query 594880 TTTTATTTTCACTTTTGAAAAATAG-ACTAAAAGAATCTGTTGTACATGAAATAATAGAT 594938 || || |||||| | ||| || || | | ||| | ||| |||||| | | Sbjct 56010 TTAAATGCTCACTTAGAAGAAAAAGCACCATATGAAAC---AGTAATCGAAATAGTTAAA 55954 Query 594939 GAAGCAATTCAAATTGAAGATGAATTTATTAATGATTCTCTTCCATGCAGATTACTTGGA 594998 |||||| | ||||||| | |||||| || ||| ||| || || ||| ||||| Sbjct 55953 GAAGCAGTAGCAATTGAACAAGAATTTGTTTCTGAAAGTCTACCCGTAAGTTTAATTGGA 55894 Query 594999 ATGAA 595003 ||||| Sbjct 55893 ATGAA 55889 Score = 87.8 bits (96), Expect = 1e-11 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 361460 GGTAAATCAATTTTAATATGAATTCCAAATCTTCCTGATCTTTTTACTGCTGGATCTAAT 361519 |||||| || || ||| || | | |||||||||| | |||| || ||| ||||| Sbjct 81457 GGTAAAGGAACTTCAATGTGTAATTCAAATCTTCCAGGTCTTAATAATGCGCTATCTATC 81516 Query 361520 AATTCTAATCTATTTGTTATACCGAT-ACAAATAAAATTATTAAATTGTTCTAAACCATC 361578 || || |||||||| || || || || |||| || | ||||| ||| ||||| |||||| Sbjct 81517 AAATCCAATCTATTGGTCATTCCTATTACAAGTATA-TTATTTAATGATTCTACACCATC 81575 Query 361579 CATTTCTGCTAAAAATTGATTTACAAC 361605 ||||| || | ||||||||||| || Sbjct 81576 CATTTTTGTAAGTAATTGATTTACTAC 81602 >seq367 Length=8762 Score = 123 bits (136), Expect = 2e-22 Identities = 224/324 (69%), Gaps = 8/324 (2%) Strand=Plus/Minus Query 269153 TTTTATCGCCCACCATTTGTTTTAAACGCTGATAATATGTCGGACCAATAAATATTTTGA 269212 ||||||| | ||||| || |||| | || |||||||| ||||| | ||||||||| Sbjct 8102 TTTTATCTTCTACCATATGCTTTAGTCTTTGGTAATATGTAGGACCTACAAATATTTTTG 8043 Query 269213 CATGCATTTTTTCTCCCGTCATACCATTTGTCATTGTTTCATTTCCCCATGCTTCAT--- 269269 | || | |||| || ||||| ||||| ||| ||| | | | | || || Sbjct 8042 CTTGGAGTTTTCTACCAGTCATTCCATTGTACATAACTTC---TACACCTCTTTTATGGA 7986 Query 269270 ATCCGTATGAAACTAGTTCATCATTTATTTTAT-TAATATCTACACCTGTAAATGGTGTC 269328 |||| || || || || || ||||| || || | | |||| ||| |||||||| Sbjct 7985 ATCCATAGGATTTTAATTTCTCTGATATTTCATCTACTGT-TACATCTGAGAATGGTGTA 7927 Query 269329 GCATCACCATATACTCCTTTAATAGCACATACTTTTCCTAATAGACATTCAATCAATTGT 269388 ||||||| | | |||| | | ||||| |||||||||||||| |||||| || || ||| Sbjct 7926 CCATCACCCTCTTCTCCACTGAGAGCACTTACTTTTCCTAATAAACATTCTATTAAATGT 7867 Query 269389 CCAATGGTCATACGTTTTGGCATACAATTAGGATTAATAATAATATCTGGCACAAGTCCA 269448 ||||||| ||| | | ||| | || || || ||||| | |||||| | | ||| Sbjct 7866 CCAATGGACATTCTTGATGGAAATGCATGTGGGTTCATAATCACATCTGGTATCAATCCT 7807 Query 269449 GATTTAGTAAATGGCATATCTGCT 269472 ||| ||||||||||| ||| || Sbjct 7806 TCTTTGGTAAATGGCATTTCTTCT 7783 >seq168 Length=81637 Score = 107 bits (118), Expect = 1e-17 Identities = 185/269 (69%), Gaps = 15/269 (6%) Strand=Plus/Plus Query 290720 AATAAACCGTCATTAATATTCATTAATGAAATATCTAATGTTCCTGCACCAAAATCGTAT 290779 |||| ||| ||||| | | || | ||||| ||| |||||||| |||| ||||| || Sbjct 68903 AATACACCATCATTTAACTCCAAAATTGAAACATCAAATGTTCCACCACCTAAATCATAC 68962 Query 290780 ATAATAACATTACCTCCATTTTTATTTGTCCAAGTTTTGCTTCCAAGACCATATGTTAAT 290839 | ||| | ||||||||||| || || ||| |||||||| | | Sbjct 68963 ACTGCGACAAT---TCCATTTTTAT----CCTTGT--------CAACACCATATGCCAGT 69007 Query 290840 GAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGAA 290899 | || ||||||||||||||||||| | | || || | || || | | |||| ||| Sbjct 69008 GCTGCAGCTGTTGGTTCATTTATAACACGTGCAACCTCTATTCCAGCCACTCTTGCAGAA 69067 Query 290900 TCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTTT 290959 | | || || || ||||| ||||||| |||||| ||||| |||||||||||||| Sbjct 69068 TTTTTTGTAGCTTGTCGTTGTGCATCATCAAAATATGCAGGTACTGTAATAACAGCCGAA 69127 Query 290960 TCCACTTTCTTTTTCAAATAATTTTCTGC 290988 |||||||| | || | | || |||||| Sbjct 69128 TCCACTTTTCTCTTAAGAAAAGATTCTGC 69156 Score = 102 bits (112), Expect = 5e-16 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 || || ||||| || || ||||||||| ||||| | ||||| ||||| || ||| || | Sbjct 69123 GCTGTTATTACAGTACCTGCATATTTTGATGATGCACAACGACAAGCTACAAAAAATTCT 69064 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 | |||| | || || | | ||| |||| |||| |||||||||||||| || ||||| Sbjct 69063 GCAAGAGTGGCTGGAATAGAGGTTGCACGTGTTATAAATGAACCAACAGCTGCAGCACTG 69004 Query 474857 GCTTATGGTCTTGATAAGAAT 474877 || |||||| |||| ||| || Sbjct 69003 GCATATGGTGTTGACAAGGAT 68983 >seq301 Length=54622 Score = 95.1 bits (104), Expect = 8e-14 Identities = 208/309 (67%), Gaps = 2/309 (1%) Strand=Plus/Minus Query 318676 TTATCATTAGCATTTCTTACAGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTA 318735 |||| |||| ||||||| ||| ||||||||||| | | | |||||||| | || Sbjct 20460 TTATTATTACCATTTCTAACACTACCATCATATGCAATAGAACAATCTTCTAAACTCTTG 20401 Query 318736 ACTAATTTTCTTTGTACATAACCTGTGTCTGCAGTTTTAATAGCAGTATTAATAATACCT 318795 || | | ||||||| | ||||| || || | |||||||| | ||||| ||| | ||| Sbjct 20400 ACAAGTCTTCTTTGAATGTAACCAGTTTCAGATGTTTTAATCGAAGTATCAATCAATCCT 20341 Query 318796 TCTCTTCCTGCCATAACTTGGAAAAAGAATTCAGCAGGTCCTAA-ACCTTTAATAAATGA 318854 ||||| ||| |||| |||||||| ||||| |||| ||| || ||| ||| | Sbjct 20340 TCTCTACCTCCCATTGTATGGAAAAATAATTCTTCAGGAATTAATCCCGATAAAAAACTA 20281 Query 318855 ACTTGGACAAAAACCTCTAGCTAAAGCACTGTCATCATGTTGTGCAAACATTGGAAGAGT 318914 || || |||||||||| | || | || |||| || | ||| ||| | || Sbjct 20280 TTTTCTAC-AAAACCTCTACTTTCAGGGCCGTGATCACCTTTAGAAAAATGTGGTAATGT 20222 Query 318915 TCTATTATTAAATCTCTTTTGAATTCTTTTATCTTCGACAATAACTTGACCAATACAACC 318974 | | ||| |||| | ||||||||| |||| ||| | ||| |||| ||| | Sbjct 20221 ACGTTCATTGAATCCAAACGGTATTCTTTTACCTTCAACATTCTGTTGTCCAACACATGC 20162 Query 318975 TGCTATTTG 318983 || || ||| Sbjct 20161 TGTTACTTG 20153 Score = 86.0 bits (94), Expect = 4e-11 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 321684 ATAACAAAATTAGCTCCGGGATATACACGACGCCCATTTTTTACTAATTGTGTGAGATAT 321743 || ||| |||| ||||| ||||| | | | || |||| || |||| | | | | Sbjct 19083 ATTACATAATTTGCTCCAGGATAATTATAAGGACCTCTTTTAACCAATTCTTCTAAAAAA 19024 Query 321744 TCAATATTATGTTCCGTAACAATTTCATCAAATGTAAGATTTTTTGCAATAATTAATGGT 321803 ||||||||| || || ||||| ||||| ||| |||| ||||| | || Sbjct 19023 TCAATATTAAAACTAGTTACTCTTTCAGGAAATGAAAGGATTTTAGCAATTTGTTCCGGA 18964 Query 321804 AAACCAACTTCATTCAGTGCAATATTTGGATCAGATGTGATAACTGTACGACCAGACATA 321863 | || ||||||| || ||||||| | ||||| ||| ||||| | | |||| | | Sbjct 18963 ACTCCTACTTCATCAAGCCCAATATTAGAATCAGGTGTAATAACACTTCTTGCAGAAAAA 18904 Query 321864 TCAACACGTTTACCCATAAGATTTCCTCTAATACGACCTTCTTTTCC 321910 ||||| | ||||||||||||||| ||||| | | |||||||| || Sbjct 18903 TCAACCCTTTTACCCATAAGATTACCTCTTACTCTTCCTTCTTTACC 18857 >seq112 Length=277427 Score = 95.1 bits (104), Expect = 8e-14 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 318682 TTAGCATTTCTTACAGTACCATCATATTCCACTTTAATATCTTCTAGTATTTTAACTAAT 318741 ||| || ||| |||||| |||||| || ||||||| | |||| ||||| |||| Sbjct 173295 TTATCAGATCTAACAGTATGATCATACTCTACTTTAAGACTCTCTAAATGTTTAATTAAT 173236 Query 318742 TTTCTTTGTACATAACCTGTGTC-TGCAGTTTTAATAGCAGTATTAATAATACCTTCTCT 318800 |||||||| ||| || | | ||| ||||||| |||||||| || | ||||||||| Sbjct 173235 GATCTTTGTAAATATCCAGAAACGTGC-GTTTTAACAGCAGTATCCATTAAACCTTCTCT 173177 Query 318801 TCCTGCCATAACTTGGAAAAAGAATTCAGCAGGT 318834 |||||||||| |||||||| |||| || ||| Sbjct 173176 TCCTGCCATACAATGGAAAAAATATTCTGCGGGT 173143 >seq157 Length=84007 Score = 93.3 bits (102), Expect = 3e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 480561 AGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCT 480620 || || | |||||||||| |||||| | ||| |||||| | ||||| |||| Sbjct 52128 AGAACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAATCACTCAATGTTCTACCATCT 52069 Query 480621 TCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCT 480680 || | ||| || || ||||| || | | ||||||||| ||||| ||||||||||||||| Sbjct 52068 TCCAATTGTTTACCTGCAAATATCAATCTTTGTTGATCTGGAGGTATTCCTTCCTTGTCT 52009 Query 480681 TGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTT 480740 || || ||| ||||||| ||| || | || ||| | ||| || || || || Sbjct 52008 TGTATTTTTGCTTTGACATTTTCTATGGAGTCGGTGGATTCGACTTCTAGTGTGATTGTC 51949 Query 480741 TTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || || || || Sbjct 51948 TTGCCCGTAAGCGTTTTGACAAATATCTG 51920 >seq46 Length=104894 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 627769 CCATCACGTCCTGCTCTACCTATTTCTTGATAATAACCTTCGATATTTTTAGGTGCGCCA 627828 ||||| | ||| |||||||| ||||||||||||| ||||| | | |||| || | Sbjct 88729 CCATCTCTTCCAGCTCTACCACTTTCTTGATAATATCCTTCTACACTTTTTGGAAGAGTA 88670 Query 627829 TAATGTATTACTGCTCTCACATCTGATTTATTAATACCCATTCCAAATGCAATTGTTGCA 627888 ||||||||||| || |||||| | ||| |||||||| |||||||| ||||| || Sbjct 88669 TAATGTATTACAAATCGTACATCTTTTCTATCTATACCCATACCAAATGCTATTGTAGCT 88610 Query 627889 ACCATTATATT 627899 || || || || Sbjct 88609 ACAATAATTTT 88599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268162471007720