Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887945.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq370 120 9e-22 >seq370 Length=149473 Score = 120 bits (132), Expect = 9e-22 Identities = 150/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227 ||||||||||||| | ||| | ||| |||| | |||||| || |||| || | || Sbjct 54578 ACATTATGAATATTAATTCCTAGACCTCCTGCACTTTTAGATATAAGAGCACAGTTTTTC 54519 Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287 ||||||| ||| |||||||| |||||||| |||| || | ||| | || ||||| Sbjct 54518 ACAGTATCGAATATACCTTCTATAGAATCCTCTTTGATATCCAAAAGAAAACATGAACTC 54459 Query 156288 AATTGA--GGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345 |||||| || | |||||| | || || | |||||||||||| ||||||||||| | Sbjct 54458 AATTGATTATTCTT--TGTTCCGGAATTAAACAATGTAGGTGTTGCGTGAATAAAATATT 54401 Query 156346 TATTAGACATATAATCGTATGTCT 156369 | |||||||| ||| || |||| Sbjct 54400 TTTTAGACATTAAATTATACGTCT 54377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810245511430