Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887945.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq24 205 3e-47 seq290 196 1e-44 seq301 141 3e-28 seq370 132 1e-25 seq326 116 1e-20 seq179 111 5e-19 seq61 100 9e-16 seq367 96.9 1e-14 seq246 89.7 2e-12 >seq24 Length=118493 Score = 205 bits (226), Expect = 3e-47 Identities = 591/906 (65%), Gaps = 32/906 (4%) Strand=Plus/Plus Query 223424 ACTCTTCTTTCaaaaaaaTTTGTTTTTCCTTCTATACTTATCATTTCCATAAAATCAAAC 223483 |||||| ||||||| ||||| |||||||||| || | ||| ||||||| |||||||| Sbjct 55739 ACTCTTTTTTCAAAGAAATTGGTTTTTCCTTGTAAAGATATATTTTCCATGAAATCAAAT 55798 Query 223484 GGATTACTAGAATTATAAATTTTATTATTTCCTAATTGAACTGCTAATCTATCTGCTACA 223543 ||||| || || ||| |||| ||||| | |||| | | || || ||| Sbjct 55799 GGATTTTCAGTGTTGTAATGTTTAGAGAATCCTAGATCAACTAAGAGATTGTCAGCCACA 55858 Query 223544 AATTCTATATATTGTGACATTAATTTACTATTCATACCTATTAAATTACACGGCAATGCT 223603 |||||||| || | |||| |||||| ||||| || |||||| | |||| | || Sbjct 55859 AATTCTATGTAATTACACATAGATTTACAGTTCATTCCAATTAAACTT-ACGGGTAGACT 55917 Query 223604 T-CACAGATAAACTCTTTTTCTATTTCTACCGCATTTTTTATTATTNNNNNNNNNNNNNN 223662 | || | | ||| |||| ||| ||| |||| || | ||| | |||| Sbjct 55918 TTCAGAAACAAATTCTTGTTCAATTGCTACTGCTTCTTTAACTATTTCGATTACTGTTTC 55977 Query 223663 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATACA-GCAAATTCTGTATGTAATG 223721 | ||| |||||||| ||| | | Sbjct 55978 ATATGGTGCTTTTTCTTCTAAGTGAGCATTTAAGAG-ACATGCAAATTCAACATGCACTC 56036 Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781 | |||||||| ||||||||||| || || || | || |||||||| || | |||| Sbjct 56037 CTTCATCTCTACTGATTAATTCATTGGAGAAAGTAAGACCTGGCATTAATCCACGTTTTT 56096 Query 223782 TCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACG 223841 | | ||| ||||| | ||||| ||| || || || ||||||||||| || ||||| | Sbjct 56097 TAAGCCAGAATATGGATGCAAAAGATCCAGAGAAGAAAATACCTTCTACGCACGCAAATG 56156 Query 223842 CTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGCCCAATCTG 223901 | | || || ||| |||||| ||| | ||| || ||||||||| | | ||| |||| Sbjct 56157 CAATTATTCTTGTAGCAAAACATGATTTTTTATCCGTTATCCATTTCATAGTCCAGTCTG 56216 Query 223902 CTTTTTTCTTAATACAAGAAAAATTTTCTAAA--GCATTAAACAACTTCGATTTCTCATT 223959 |||| || ||||| | ||| | ||| || ||||| || ||| | | Sbjct 56217 CTTTATTTTTAATTGTTG--GTATTGTAGAAATTGCGTTAAATAAAAAATCTTTTTTCTC 56274 Query 223960 ATGATCACTTATATATGTTTCTATTA--ATTGACTATACATTATTGAATGTATATTTTCC 224017 || || || |||||||||||||||| | ||| ||||| |||||||||||||| Sbjct 56275 TTGTTCTCTAATATATGTTTCTATTAGCAATGA--GTACATCTCAGAATGTATATTTTCT 56332 Query 224018 ATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTTCTG-TCATAAA 224076 || |||||| |||||||||| | | || |||| ||| || ||||| | | ||| Sbjct 56333 ATCATTATTTGGAATCCATAAACACATCTAGCTTCTGGTATCTGAACTTCCGCTGCAAAA 56392 Query 224077 TCTTAATCCTAA---ATTCTCTAATACTATACCATCACTTGCCGCAAAAAATGCCAATAT 224133 | || |||| ||| || || || ||||| ||| |||||||||||||| | Sbjct 56393 TTTT----CTAAAAGATTTTCATTAACAATCCCATCTGATGCTGCAAAAAATGCCAACA- 56447 Query 224134 CAT-AGAAATAAAATATCTTTCATCATTGGTTAATGATAA--CCAGTGCGATAAATCTTT 224190 ||| | ||||||| |||||||||| | |||| || | ||| | |||||| || Sbjct 56448 CATAACTTATAAAATGTCTTTCATCA-TCATTAA-GACCATTCCAATCGTCTAAATCATT 56505 Query 224191 TGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACATTTCCCA 224250 |||||||| ||||||| || ||||||| | ||| | ||||| | ||||| Sbjct 56506 AGATAAATCTACTTCTTCAGCAGTCCAAAACGATGAAAGTGCCTGCTTATATAAATCCCA 56565 Query 224251 TATATCTTGGTCTTGTATCGGAAACATTACAAAGCGACTATCGTC---TGATGTTAATAA 224307 |||| | || || ||| ||||||| ||||| ||||| || || ||| |||| Sbjct 56566 TATACGATCGTATTTTATTGGAAACAAAACAAA---TCTATCTTCAGTTGGTGTCAATAG 56622 Query 224308 TGGTTC 224313 |||||| Sbjct 56623 TGGTTC 56628 >seq290 Length=54858 Score = 196 bits (216), Expect = 1e-44 Identities = 188/241 (78%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 140497 TAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAA 140556 ||| |||||| ||||||| | |||||||| || | ||| | ||||| || || || | Sbjct 33830 TAACATTTTAATTACCACCTCTTAATCTTAATACTAAATGCAACGTAGATTCCTTCTGTA 33889 Query 140557 TATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTT 140616 |||||||||| |||||||| ||||| || || |||||||| ||||| || | | | Sbjct 33890 TATTATAATCGCTTAATGTTCTACCATCCTCGAGCTGTTTTCCTGCAAATATCAATCTCT 33949 Query 140617 GCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAAT 140676 | ||||| ||||| ||||||||||||||||| || ||||| |||||||| || || | || Sbjct 33950 GTTGATCTGGAGGTATTCCTTCTTTATCCTGTATCTTAGCCTTTACATTTTCTATAGTAT 34009 Query 140677 CAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736 |||| ||| |||||||| |||| ||| ||||| || || ||||| ||||| ||||||| Sbjct 34010 CAGAATTTTCTACTTCAAGAGTAATTGTTTTTCCTGTGAGAGTTTTAACAAAGATCTGCA 34069 Query 140737 T 140737 | Sbjct 34070 T 34070 >seq301 Length=54622 Score = 141 bits (156), Expect = 3e-28 Identities = 271/396 (68%), Gaps = 10/396 (3%) Strand=Plus/Minus Query 378117 TGGATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTAC 378176 || |||||||||||| ||||||||| | || || | || |||| ||| ||||| || Sbjct 20500 TGCATCAAATCCATCTTCTCCATATAAAAACTGGAATATATTATTATTACCATTTCTAAC 20441 Query 378177 AGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATA 378236 | | ||||||| || |||||||||| || | ||||| || ||| || Sbjct 20440 ACTACCATCATATGCAATAGAACAATCTTCTAAACTCTTGACAAGTCTTCTTTGAATGTA 20381 Query 378237 ACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATG 378296 |||||||| | ||||||| | ||||||||| || || | | ||| ||||||| ||| Sbjct 20380 ACCAGTTTCAGATGTTTTAATCGAAGTATCAATCAATCCTTCTCTACCTCCCATTGTATG 20321 Query 378297 GAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGA--ACTCTCAATAAATCCTCTT 378354 ||| |||||||| |||| | | || || ||||| | | | || | ||| ||||| Sbjct 20320 GAAAAATAATTCTTCAGGAATTAATC--CCGATAAAAAACTATTTTCTACAAAACCTCTA 20263 Query 378355 GCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATAT 378414 | || | |||| ||| | | |||| ||||||||||| | | || ||| | Sbjct 20262 CTTTCAGGGCCGTGATCACCTTTAGAAAAATGTGGTAATGTACGTTCATTGAATCCAAAC 20203 Query 378415 GGAATTCGTTTTCCATCAACATTCTGTTGACCAA---GTGCAGAAACCATTTGAGCAATA 378471 || |||| ||| || |||||||||||||| |||| ||| | || ||||| |||| Sbjct 20202 GGTATTCTTTTACCTTCAACATTCTGTTGTCCAACACATGCTGTTAC---TTGAGAAATA 20146 Query 378472 TTTAAATCACTACCTTTAGACCCAGCATTAACCATA 378507 |||| | | ||||||| ||||| ||||||| Sbjct 20145 TTTATAAAAGAACCTTTACTACCAGCTAAAACCATA 20110 >seq370 Length=149473 Score = 132 bits (146), Expect = 1e-25 Identities = 329/493 (67%), Gaps = 11/493 (2%) Strand=Plus/Minus Query 202381 AGATAATATATTCCAGTTTTTAGTCCTTGTTTCCAACTATAAAAATGCATATTTGTTAA- 202439 ||||| || |||||||| |||| | || ||| | ||||||||||||| | || | Sbjct 56027 AGATAGTACATTCCAGTCTTTAATTGTTTTTTGTGTCCATAAAAATGCATACTAGTAAGC 55968 Query 202440 --TGATTTTGCAGTTGGATCTTCCATCCAAAGATTTAAACTTTGCGATTGACAAATATAA 202497 ||| | || | || | || || ||| ||| | | ||| |||||| || ||| Sbjct 55967 TGTGAATATGTGGGTGTAGCT---ATAAAAATATTAAGAGATTGTGATTGATCAACATAT 55911 Query 202498 GCTCCTCTATCTCTAGACATATCTATAAGATTTTTCATTGGTATCTCCCAAACAATTTTA 202557 | | |||||| || | ||||| || | ||||||| || ||||| | || || Sbjct 55910 GGTGTTCTATCAGCAGCTAAATCTAAAATAGATTTCATTTTTAATTCCCATGCTGTTCTA 55851 Query 202558 TATTTTTCTTTTAGTCGTTTTGGTATAGTGTCGATATATTGAATACTACCTTTATTCTGA 202617 || | ||| | | ||||||||||| || |||| ||| ||| ||| | |||||| Sbjct 55850 TACAAATATTTAATTTCTTTTGGTATAGCTTCTATATCTTGGATAGAACCATCGTTCTGA 55791 Query 202618 ATTATATTGTTTTTAATTGAATCATCCCAAATACCTAAATT--AATAAGATCATTAATTA 202675 | || |||||| ||| | || ||| | | ||| || | ||| ||| ||||||| Sbjct 55790 ACTACTAGGTTTTTTATTTCTTTATTCCAGAGAT-TAAGTTTTAGTAA-ATCTTTAATTA 55733 Query 202676 AATATTTATTAACAATAATAAACTCACCAGCTAGTGTTCTTCTTGAATAAATATTACTTG 202735 |||| ||| |||| ||| || ||||||| |||||||| | ||||||||| | Sbjct 55732 AATAAGAATTTACAACTTGAAAATCTCCAGCTAAAGTTCTTCTGGTATAAATATTTGAAG 55673 Query 202736 TAAATGGTTCAAAACATTCATTATTACCTAAAATTTGACTGGTACTAGCAGTTGGCATAG 202795 | || ||||| | |||||||||| ||| |||||||| ||| || || |||||| Sbjct 55672 TTAAAGGTTCTATACATTCATTAAAACCCAAAATTTGGGATGTAGATGCTGTAGGCATAA 55613 Query 202796 GTGCAACTAGTAAACTATTGCGAAGCCCATATTCTTTAATACTATGTTTAAGAGTATTCC 202855 ||||| | ||| ||| | || |||| | ||| || | | | | | | ||| || Sbjct 55612 CAGCAACAAATAATGAATTTCTAACTCCATGCTTTTTGATTTTTTCTCTCAAAATATCCC 55553 Query 202856 AATCATAATTAAT 202868 |||| |||| ||| Sbjct 55552 AATC-TAATAAAT 55541 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 206543 CTCTAATATTATGTATATGTAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATT 206602 |||| | |||||| |||| | ||| | |||||||| | ||| || ||| |||||| | Sbjct 54583 CTCTCACATTATGAATATTAATTCCTAGACCTCCTGCACTTTTAGATATAAGAGCACAGT 54524 Query 206603 CTTTTAATGTATTATAAATTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAG 206662 ||| | |||| | || || || | | ||| || ||| | | | |||||| | Sbjct 54523 TTTTCACAGTATCGAATATACCTTCTATAGAATCCTCTTTGATATCCAAAAGAAAACATG 54464 Query 206663 AACTTAATTG--TGGTCGTGGCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAA 206720 |||| ||||| | || | | |||| | |||||| || ||||| || || || |||| Sbjct 54463 AACTCAATTGATTATTCTTTG--TTCCGGAATTAAACAATGTAGGTGTTGCGTGAATAAA 54406 Query 206721 ATATTTTTGAGACATTAAATTATAAGT 206747 |||||||| ||||||||||||||| || Sbjct 54405 ATATTTTTTAGACATTAAATTATACGT 54379 Score = 91.5 bits (100), Expect = 4e-13 Identities = 170/241 (71%), Gaps = 14/241 (6%) Strand=Plus/Minus Query 203214 ATGATATATAGTTTTAAAAATAT--TAATGTTAATCTTTTTTGCTTCATCACTTTCAAAT 203271 || ||| ||||||| ||||| | | || ||||| | | ||||| ||||| |||||| Sbjct 55422 ATAATAAATAGTTTCGAAAATTTGCTTAT-TTAATAATCTA-GCTTCTTCACTATCAAAT 55365 Query 203272 GGTAAATCTAATAATAC-AAATACATCAGCTAATCCTTGTACTCCAATACCAATTGGTCG 203330 || | ||| | |||| ||||||||| ||||||||||| || |||||||| || |||| Sbjct 55364 GGCAT-TCTTAGAATAATAAATACATCGGCTAATCCTTGAACACCAATACCCATAGGTCT 55306 Query 203331 ATGATTTAAATTACTGCGTTTAGTCTTTTCTGTTGGATAAAAATTGATATCAATAATCTT 203390 ||| | | |||||| |||||| | |||| |||||| | | || || | | | Sbjct 55305 ATGTCTCATATTACTTTTTTTAGTTTCTTCTACTGGATATTTTGTTCTGTCTATTACCCT 55246 Query 203391 ATTTAAATTTTCTGTTACAA----TTTTAGTAACACTATGTAATTTTTCATAATCAAATT 203446 || ||||||| |||||| ||||| || | || | || |||| ||||||||| Sbjct 55245 ATCCAAATTTT---TTACAAGAACTTTTACTATCTCT-TTTAGTTTTATGAAATCAAATT 55190 Query 203447 T 203447 | Sbjct 55189 T 55189 >seq326 Length=233589 Score = 116 bits (128), Expect = 1e-20 Identities = 199/294 (68%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 54827 TGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTA 54886 ||| |||| || ||||| || || | || || ||||||| ||| |||||| | ||| Sbjct 208314 TGGGAAGCCACTATTATAGGTCCTCCTGGCACACCATATCAAGATGGAATATTTCAATTA 208255 Query 54887 AGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAATGTAGTTTTTACTACAAAG 54946 ||| | ||| ||||||||||| | || || || || || | |||| Sbjct 208254 GAGATTATACTCCCAGCTAATTATCCATTTCATCCACCTAAAGTGACATTCAAAACAAGA 208195 Query 54947 ATTTATCATTGTNNNNNNNNNNNNNNNNNNNNNATATGTTTAGATATATTAAAAGATCAA 55006 |||||||||||| |||||||||||||| |||||| | || Sbjct 208194 ATTTATCATTGTAATATAAAGGATGGTCAA---ATATGTTTAGATATTTTAAAAAACGAA 208138 Query 55007 TGGAGTCCTGCACTTACTACTAGTAAGATATTATTAAGTATATGTTCATTAATGAATGAT 55066 |||||||||||||| || | | ||| | |||||| ||||| || ||| | ||||| Sbjct 208137 TGGAGTCCTGCACTCACAGTTGGAAAGGTGTTATTATCTATATCATCTTTATTACATGAT 208078 Query 55067 CAGAATCCCAATGATCCTTTAGATGCAGATGCTGCTGAATTATATTTAAAAAAT 55120 ||||| || |||||||| |||||||| ||||| || ||||| |||||||| Sbjct 208077 GCCAATCCTAAAGATCCTTTGGATGCAGAGGCTGCAGATTTATACATAAAAAAT 208024 >seq179 Length=80999 Score = 111 bits (122), Expect = 5e-19 Identities = 260/385 (68%), Gaps = 17/385 (4%) Strand=Plus/Plus Query 266976 GGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATT--CC-- 267031 || ||||||||| |||| | || || ||||||||| | ||| ||||| | || Sbjct 14484 GGTGATAAATTTAGTAGTAGACATGGTCAAAAAGGTG----TTGTAGGATTAATAGCCAA 14539 Query 267032 TGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCA 267091 | ||||||||||||||||| |||||||||||| ||| ||| |||| || |||||||| Sbjct 14540 TCCAGAAAATATGCCATTTACTGAAGATGGAATAGTACCCGATCTTATAATGAATCCTCA 14599 Query 267092 TGCTATTCCTAGTCGTATGACAATTGGTCAATTAAAAGAGACACTT-TTA--GGAAAAGT 267148 || | |||| | |||||| | || || | ||| |||| ||| ||||| | Sbjct 14600 TGGTTTTCCATCAAGAATGACAGTCGGAAAAATTTTAGA---ACTTATTAATGGAAAGGC 14656 Query 267149 TTTATTAGAATTAGGTTTATTTGGTGATGGTACTAGTTTTGGTGAATTTAATATAAAAGA 267208 | ||| | | | | | || |||| ||| |||| |||| ||| | | || Sbjct 14657 TGCATT-GTTTAAAG--GAATTCAAGATGCTACCGCATTTGCTGAAAATAAAACAGAATC 14713 Query 267209 TATTTGTAAAGAATTACAAAATATTGGTTATGAATCTAAAGGTAATGAAATATTATATGA 267268 || ||||| ||| | | | ||| ||| | | | || || || ||||| ||| Sbjct 14714 AATATGTAATATTTTAAGAGAAAATGGATATAATTATTCTGGCAAGGATGTATTAATTGA 14773 Query 267269 TGGATTATCTGGTGAACAGATGAGAACAAATGTATTTATCGGGCCAGCATTTTATCAAAG 267328 |||| || |||| ||| |||| | ||||||| | || || | ||||||||||| Sbjct 14774 TGGAATAACTGGGGAAGTAATGAAAGTGTATGTATTCTTTGGTCCTGTATTTTATCAAAA 14833 Query 267329 ATTAAAACATATGGTTAGTGATAAA 267353 |||||| ||||||||| ||||||| Sbjct 14834 ATTAAAGCATATGGTTGCTGATAAA 14858 Score = 89.7 bits (98), Expect = 2e-12 Identities = 194/285 (68%), Gaps = 8/285 (3%) Strand=Plus/Plus Query 266325 ATTCCATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAA 266384 ||||| ||||| | ||||||||| | ||| | || |||||||| || ||||||||| Sbjct 13875 ATTCCTTTTCCTCATCATAATCAATCGCCTAGAAATACGTATCAATGCGCTATGGGTAAA 13934 Query 266385 CAGGCTATGGGTA-TCTATGTTACAAATTTTAATAATAGAATGGATAAAACAG---CATA 266440 ||||| ||||||| | || |||| ||| ||||||||| | ||| | |||| | | Sbjct 13935 CAGGCAATGGGTATTATAAGTTA-TAATCAGAATAATAGATTTGAT-ACACAGTTAAACA 13992 Query 266441 TGTTCATACTTATGGTATGAGACCTTTAGTAGATACTCGTGTAATGAATTTACTAAATTT 266500 || | ||||| | | |||||||||| ||| || || || ||||||| Sbjct 13993 CTTTGGT--TTATGCTCAGCGACCTTTAGTTTCTACGGAAACAACAAAGATAGTAAATTT 14050 Query 266501 ACATAAAATTCCATCTGGTGCACAAGTAATAGTAGCTATTATGACACATACTGGGTATAA 266560 ||||| ||||| | || | | | || |||| | ||| || || |||| ||| | Sbjct 14051 CGATAAACTTCCAGCAGGACAAAATGCTATGATAGCGGTAATGTCATATTCTGGATATGA 14110 Query 266561 TCAAGAAGATAGTATATTATTTAATAAAGGATCTATTGAAAGAGG 266605 | |||||| ||| | || ||||||| ||| | |||||||| Sbjct 14111 TATTGAAGATGCAATAATTTTGAATAAAGCATCAGTAGAAAGAGG 14155 Score = 84.2 bits (92), Expect = 7e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 251155 TTCTAATAATTGTCCAATGGTCATTCTACTAGGCAATGCGTGTGGATTAATAATAATATC 251214 |||||| | || ||| | |||||||| || || | || ||||| || |||| ||| Sbjct 14639 TTCTAAAATTTTTCCGACTGTCATTCTTGATGGAAAACCATGAGGATTCATTATAAGATC 14580 Query 251215 TGGACGAATTCCATCTTCAGTAAAAGGCATATTTTTCTCATCAATAACTAAACCAATAGT 251274 || ||||||||||||||||| |||||||||| || | ||| || | | Sbjct 14579 GGGTACTATTCCATCTTCAGTAAATGGCATATTTTCTGGATTGGCTATTAATCCTACAAC 14520 Query 251275 ACCTTTTTGTCCACATCTACTACAAAACTTATCTCCAATTGCAGGAATTCT 251325 ||||||||| ||| |||||||| ||| ||||| |||| | || ||||| Sbjct 14519 ACCTTTTTGACCATGTCTACTACTAAATTTATCACCAACCTCTGGGATTCT 14469 >seq61 Length=1802 Score = 100 bits (110), Expect = 9e-16 Identities = 169/241 (70%), Gaps = 14/241 (6%) Strand=Plus/Plus Query 390830 AGAAGAAGATGATTTAGGGCCAGTATATGGACATCAATGGAGACATTTTAATGCACCATA 390889 ||||||||||||| |||| || |||||||| |||||||| ||||| ||||| ||||| Sbjct 1569 AGAAGAAGATGATCTAGGTCCTGTATATGGTTTTCAATGGAACCATTTCAATGCTCCATA 1628 Query 390890 TACAAACTGTGAAACAGACTATACAGATAAAGGTGTAGATCAATTAGAATAT---ATTAT 390946 | || ||| |||| || || |||| |||||||| |||| ||| || || || Sbjct 1629 TGTTAATTGTAAAACTGATTACACAGGAAAAGGTGTTAATCAGTTACAAAATGCGATAGA 1688 Query 390947 TAATTGTCTAAAAGATCCAAAAGAGAGATATTCAAGAAGACTAGTTA-TGTCAGCCTGGA 391005 || | | |||||||| || || |||||| | |||| |||| || |||| Sbjct 1689 TATTATTAAGAAAGATCC-AACCAG--------TAGAAGAATGGTTATTGTC-GCATGGA 1738 Query 391006 ATCCTAGTCAACTAGGAGAAATGGCATTACCTCCGTGCCATATTTTAGCTCAATTTAATG 391065 |||| ||| || | |||||||| | || || || ||| |||| ||||||| ||| Sbjct 1739 ATCCCGAACAATTACGGGAAATGGCTCTTCCACCATGTCATTGTTTATTTCAATTTTATG 1798 Query 391066 T 391066 | Sbjct 1799 T 1799 >seq367 Length=8762 Score = 96.9 bits (106), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 14/231 (6%) Strand=Plus/Plus Query 267468 CACGGTGCATCTAGATTTAATAAAGAAAGATTACTCGATGCATCAGATAAATTTAAAATC 267527 || || ||||| |||| |||||||||||| |||| |||||| | || | | Sbjct 8216 CATGGAGCATCATTATTTCTTAAAGAAAGATTGTGTGATGTTTCAGATGCTTATAGAGTA 8275 Query 267528 CAAGTATGTAAAAAATGTGGTCTTATTGCTGCTTATA-------ATAACAAAGAGCATAT 267580 ||||||| | |||||| ||| ||| ||| ||| ||||| ||| Sbjct 8276 GCGATATGTAATATATGTGG----ATTACTGGCTATCTCCAACCATAGTAAAGAT--TAT 8329 Query 267581 TCATATATGTAAAACTTGTAATAATACAACAGAATTTAGTAATGTATATTTACCATATGC 267640 | || | |||||| ||||||||||||||| | | || | ||| | | |||||||| Sbjct 8330 T-ATTTCTGTAAAGGATGTAATAATACAACAAAGATAAGCATAGTAGAAGTTCCATATGC 8388 Query 267641 TTGTAAATTATTATTTCAAGAATTAATAACAATGAATATTGCACCAAGAAT 267691 || ||||||||| || |||||||| || |||||||||| ||||||||||| Sbjct 8389 TTTTAAATTATTGTTACAAGAATTGATGGCAATGAATATAGCACCAAGAAT 8439 Score = 84.2 bits (92), Expect = 7e-11 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 266972 AATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACG--ATTATT 267029 ||| || ||||||||| || ||| || ||||| ||||||||||| || | | |||| Sbjct 7720 AATAGGAGATAAATTTGCTTCTCGACATGGACAGAAAGGTACCATAGGAATGACATTAAG 7779 Query 267030 CCTGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCT 267089 | ||||| | |||||||||| |||| ||| | | ||| ||| | ||||| || || Sbjct 7780 AC--AAGAAGAAATGCCATTTACCAAAGAAGGATTGATACCAGATGTGATTATGAACCCA 7837 Query 267090 CATGCTATTCCTAGTCGTATGACAATTGGTCAATTAAAAGAGACACTTTTAGGAAAAGT 267148 ||||| |||| | ||| | ||||| || |||| ||| | ||||||||||| Sbjct 7838 CATGCATTTCCATCAAGAATGTCCATTGGACATTTAATAGAATGTTTATTAGGAAAAGT 7896 >seq246 Length=60991 Score = 89.7 bits (98), Expect = 2e-12 Identities = 267/401 (67%), Gaps = 27/401 (7%) Strand=Plus/Plus Query 67000 GATGGTTCTAAAACT---AAATCAATTCGTGGTATTCCTAAATTAATAGATGCAAATTTT 67056 ||||||||||||| | | || ||| | | |||| || ||| |||||| || Sbjct 11674 GATGGTTCTAAAAATGTTAGAT--ATTTG-GATATTGAAAAGTTAGAAGATGCTAACAGA 11730 Query 67057 GCAGGAACAGCTAAATCTGGTCAATGTACACTAATATTATGTGAGGGAGATTCAGCTAAA 67116 |||||||| | | | ||| |||| | |||| ||| || |||||||||||||| Sbjct 11731 GCAGGAACTGTTGATTCTTACAAATGCTCTTTAATTTTAACAGAAGGAGATTCAGCTAAG 11790 Query 67117 GCTGGTATTGTATCTGGTCTAACAAGAGAAGATAGAAAT-ATTATTGGCGTTTATCCTAT 67175 | | || | || ||| || | || | | || ||||| || || | |||| | Sbjct 11791 ACATTTGTTATGTCAGGTATAGGTCTTGTAGGAAAAGATCATTAT-GGTGTATTTCCTTT 11849 Query 67176 GAAAGGTAAATTATTAAATGTAAGAGGGGAACCACTCTCTAAAA--TTGGAGGTAATAAA 67233 |||||||||| | ||||||||| ||| | | ||| | || | || | |||||| Sbjct 11850 GAAAGGTAAACTTTTAAATGTACGAGAAG--CTTCTCACAAACAGATTATGGAAAATAAA 11907 Query 67234 GAAATCACTGAAATTAAACAAATCTTAGGATTAGAACACGGTAAAGAATATACTGAAAAA 67293 ||| | | | |||||| |||| |||||||| |||| |||||||||| | ||| Sbjct 11908 GAATTGATAAATATTAAAAAAATAATAGGATTAAAACAAGGTAAAGAAT------ACAAA 11961 Query 67294 GATGTTACTACTAAACTT-CGTTATGGTAAAATCCTTTTTATGACAGATCAAGATTTAGA 67352 |||| || | | || | ||||| | || | ||||||| ||||||||| || Sbjct 11962 GATG----TAAAAGATTTAAGATATGGGCATATTATAATTATGACGGATCAAGATCATGA 12017 Query 67353 TGGTAGTCATATTAAAGGATTAGGTT--TAAATCTCTTTGA 67391 |||| ||||| |||||||| ||| | ||| ||||||| Sbjct 12018 TGGTTCCCATATCAAAGGATT--GTTGATTAATTTCTTTGA 12056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246828463170