Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887945.1_202016-12-01] 390 sequences; 5,764,773 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq157 134 3e-26 >seq157 Length=84007 Score = 134 bits (148), Expect = 3e-26 Identities = 162/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATC-CGCAAGGGTCCTTC 210957 ||| || || | ||||| || || ||||| ||||| || ||||| | ||| | || | | Sbjct 52132 TCTAAGAACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAATCACTCAATGTTC-TAC 52074 Query 210958 CATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCT 211017 ||||||||| || || ||||| || || | | |||||| || ||||| | |||||||| Sbjct 52073 CATCTTCCAATTGTTTACCTGCAAATATCAATCTTTGTTGATCTGGAGGTATTCCTTCCT 52014 Query 211018 TGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGA 211077 |||| || || ||| ||| || ||||| |||| ||| | | ||| || || || |||| Sbjct 52013 TGTCTTGTATTTTTGCTTTGACATTTTCTATGGAGTCGGTGGATTCGACTTCTAGTGTGA 51954 Query 211078 TCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 | ||||| ||||| || || || ||||| | ||||||| Sbjct 51953 TTGTCTTGCCCGTAAGCGTTTTGACAAATATCTGCATT 51916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159146207862350