Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887975.1_202016-12-01] 422 sequences; 5,802,241 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq56 120 9e-22 >seq56 Length=107489 Score = 120 bits (132), Expect = 9e-22 Identities = 150/204 (74%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227 ||||||||||||| | ||| | ||| |||| | |||||| || |||| || | || Sbjct 12584 ACATTATGAATATTAATTCCTAGACCTCCTGCACTTTTAGATATAAGAGCACAGTTTTTC 12525 Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287 ||||||| ||| |||||||| |||||||| |||| || | ||| | || ||||| Sbjct 12524 ACAGTATCGAATATACCTTCTATAGAATCCTCTTTGATATCCAAAAGAAAACATGAACTC 12465 Query 156288 AATTGA--GGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACT 156345 |||||| || | |||||| | || || | |||||||||||| ||||||||||| | Sbjct 12464 AATTGATTATTCTT--TGTTCCGGAATTAAACAATGTAGGTGTTGCGTGAATAAAATATT 12407 Query 156346 TATTAGACATATAATCGTATGTCT 156369 | |||||||| ||| || |||| Sbjct 12406 TTTTAGACATTAAATTATACGTCT 12383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471809642066214