Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001887975.1_202016-12-01] 422 sequences; 5,802,241 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq145 205 3e-47 seq57 143 8e-29 seq256 141 3e-28 seq56 138 3e-27 seq333 116 1e-20 seq156 111 5e-19 seq405 96.9 1e-14 seq278 89.7 2e-12 >seq145 Length=92206 Score = 205 bits (226), Expect = 3e-47 Identities = 591/906 (65%), Gaps = 32/906 (4%) Strand=Plus/Plus Query 223424 ACTCTTCTTTCaaaaaaaTTTGTTTTTCCTTCTATACTTATCATTTCCATAAAATCAAAC 223483 |||||| ||||||| ||||| |||||||||| || | ||| ||||||| |||||||| Sbjct 84960 ACTCTTTTTTCAAAGAAATTGGTTTTTCCTTGTAAAGATATATTTTCCATGAAATCAAAT 85019 Query 223484 GGATTACTAGAATTATAAATTTTATTATTTCCTAATTGAACTGCTAATCTATCTGCTACA 223543 ||||| || || ||| |||| ||||| | |||| | | || || ||| Sbjct 85020 GGATTTTCAGTGTTGTAATGTTTAGAGAATCCTAGATCAACTAAGAGATTGTCAGCCACA 85079 Query 223544 AATTCTATATATTGTGACATTAATTTACTATTCATACCTATTAAATTACACGGCAATGCT 223603 |||||||| || | |||| |||||| ||||| || |||||| | |||| | || Sbjct 85080 AATTCTATGTAATTACACATAGATTTACAGTTCATTCCAATTAAACTT-ACGGGTAGACT 85138 Query 223604 T-CACAGATAAACTCTTTTTCTATTTCTACCGCATTTTTTATTATTNNNNNNNNNNNNNN 223662 | || | | ||| |||| ||| ||| |||| || | ||| | |||| Sbjct 85139 TTCAGAAACAAATTCTTGTTCAATTGCTACTGCTTCTTTAACTATTTCGATTACTGTTTC 85198 Query 223663 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATACA-GCAAATTCTGTATGTAATG 223721 | ||| |||||||| ||| | | Sbjct 85199 ATATGGTGCTTTTTCTTCTAAGTGAGCATTTAAGAG-ACATGCAAATTCAACATGCACTC 85257 Query 223722 CCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCTCTCTTTT 223781 | |||||||| ||||||||||| || || || | || |||||||| || | |||| Sbjct 85258 CTTCATCTCTACTGATTAATTCATTGGAGAAAGTAAGACCTGGCATTAATCCACGTTTTT 85317 Query 223782 TCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAAGCAAACG 223841 | | ||| ||||| | ||||| ||| || || || ||||||||||| || ||||| | Sbjct 85318 TAAGCCAGAATATGGATGCAAAAGATCCAGAGAAGAAAATACCTTCTACGCACGCAAATG 85377 Query 223842 CTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGCCCAATCTG 223901 | | || || ||| |||||| ||| | ||| || ||||||||| | | ||| |||| Sbjct 85378 CAATTATTCTTGTAGCAAAACATGATTTTTTATCCGTTATCCATTTCATAGTCCAGTCTG 85437 Query 223902 CTTTTTTCTTAATACAAGAAAAATTTTCTAAA--GCATTAAACAACTTCGATTTCTCATT 223959 |||| || ||||| | ||| | ||| || ||||| || ||| | | Sbjct 85438 CTTTATTTTTAATTGTTG--GTATTGTAGAAATTGCGTTAAATAAAAAATCTTTTTTCTC 85495 Query 223960 ATGATCACTTATATATGTTTCTATTA--ATTGACTATACATTATTGAATGTATATTTTCC 224017 || || || |||||||||||||||| | ||| ||||| |||||||||||||| Sbjct 85496 TTGTTCTCTAATATATGTTTCTATTAGCAATGA--GTACATCTCAGAATGTATATTTTCT 85553 Query 224018 ATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTTCTG-TCATAAA 224076 || |||||| |||||||||| | | || |||| ||| || ||||| | | ||| Sbjct 85554 ATCATTATTTGGAATCCATAAACACATCTAGCTTCTGGTATCTGAACTTCCGCTGCAAAA 85613 Query 224077 TCTTAATCCTAA---ATTCTCTAATACTATACCATCACTTGCCGCAAAAAATGCCAATAT 224133 | || |||| ||| || || || ||||| ||| |||||||||||||| | Sbjct 85614 TTTT----CTAAAAGATTTTCATTAACAATCCCATCTGATGCTGCAAAAAATGCCAACA- 85668 Query 224134 CAT-AGAAATAAAATATCTTTCATCATTGGTTAATGATAA--CCAGTGCGATAAATCTTT 224190 ||| | ||||||| |||||||||| | |||| || | ||| | |||||| || Sbjct 85669 CATAACTTATAAAATGTCTTTCATCA-TCATTAA-GACCATTCCAATCGTCTAAATCATT 85726 Query 224191 TGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACATTTCCCA 224250 |||||||| ||||||| || ||||||| | ||| | ||||| | ||||| Sbjct 85727 AGATAAATCTACTTCTTCAGCAGTCCAAAACGATGAAAGTGCCTGCTTATATAAATCCCA 85786 Query 224251 TATATCTTGGTCTTGTATCGGAAACATTACAAAGCGACTATCGTC---TGATGTTAATAA 224307 |||| | || || ||| ||||||| ||||| ||||| || || ||| |||| Sbjct 85787 TATACGATCGTATTTTATTGGAAACAAAACAAA---TCTATCTTCAGTTGGTGTCAATAG 85843 Query 224308 TGGTTC 224313 |||||| Sbjct 85844 TGGTTC 85849 Score = 196 bits (216), Expect = 1e-44 Identities = 188/241 (78%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 140497 TAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAA 140556 ||| |||||| ||||||| | |||||||| || | ||| | ||||| || || || | Sbjct 32838 TAACATTTTAATTACCACCTCTTAATCTTAATACTAAATGCAACGTAGATTCCTTCTGTA 32897 Query 140557 TATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTT 140616 |||||||||| |||||||| ||||| || || |||||||| ||||| || | | | Sbjct 32898 TATTATAATCGCTTAATGTTCTACCATCCTCGAGCTGTTTTCCTGCAAATATCAATCTCT 32957 Query 140617 GCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAAT 140676 | ||||| ||||| ||||||||||||||||| || ||||| |||||||| || || | || Sbjct 32958 GTTGATCTGGAGGTATTCCTTCTTTATCCTGTATCTTAGCCTTTACATTTTCTATAGTAT 33017 Query 140677 CAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCA 140736 |||| ||| |||||||| |||| ||| ||||| || || ||||| ||||| ||||||| Sbjct 33018 CAGAATTTTCTACTTCAAGAGTAATTGTTTTTCCTGTGAGAGTTTTAACAAAGATCTGCA 33077 Query 140737 T 140737 | Sbjct 33078 T 33078 >seq57 Length=2400 Score = 143 bits (158), Expect = 8e-29 Identities = 380/570 (67%), Gaps = 19/570 (3%) Strand=Plus/Minus Query 390830 AGAAGAAGATGATTTAGGGCCAGTATATGGACATCAATGGAGACATTTTAATGCACCATA 390889 ||||||||||||| |||| || |||||||| |||||||| ||||| ||||| ||||| Sbjct 890 AGAAGAAGATGATCTAGGTCCTGTATATGGTTTTCAATGGAACCATTTCAATGCTCCATA 831 Query 390890 TACAAACTGTGAAACAGACTATACAGATAAAGGTGTAGATCAATTAGAATAT---ATTAT 390946 | || ||| |||| || || |||| |||||||| |||| ||| || || || Sbjct 830 TGTTAATTGTAAAACTGATTACACAGGAAAAGGTGTTAATCAGTTACAAAATGCGATAGA 771 Query 390947 TAATTGTCTAAAAGATCCAAAAGAGAGATATTCAAGAAGACTAGTTA-TGTCAGCCTGGA 391005 || | | |||||||| || || |||||| | |||| |||| || |||| Sbjct 770 TATTATTAAGAAAGATCC-AACCAG--------TAGAAGAATGGTTATTGTC-GCATGGA 721 Query 391006 ATCCTAGTCAACTAGGAGAAATGGCATTACCTCCGTGCCATATTTTAGCTCAATTTAATG 391065 |||| ||| || | |||||||| | || || || ||| |||| ||||||| ||| Sbjct 720 ATCCCGAACAATTACGGGAAATGGCTCTTCCACCATGTCATTGTTTATTTCAATTTTATG 661 Query 391066 TTGTAAAAGATGAACTTTCTTGTTCATTATATCAGAGAAGTGGAGATGTAGGTTTAGGAG 391125 | | | || || | |||| |||||||| ||| || ||| | || || |||| Sbjct 660 TCGCTGATAATAAATTAAGTTGTCTTTTATATCAAAGATCCGGTGATATGGGATTGGGAG 601 Query 391126 TTCCATTTAATATTGCATCTTATAGTATTTTAACTCATATAATAGCAAAACATTGTAACT 391185 | || ||||||||||| |||| || | || || | |||||| | | | Sbjct 600 TACCTTTTAATATTGCTAGTTATTCACTTCTTGCTTTAATGGTGGCAAAAGTTACTGGAT 541 Query 391186 TAAAAGCTAAAGAATTTGTATATTATTTAGGAAATACCCATATTTACGATGATCATATTG 391245 || || | |||||| | ||| |||||| || ||| | || || |||| |||| Sbjct 540 TAGAACCAGGTGAATTTATCCATTCTTTAGGTGATGTTCATTTATATGAGAATCACATTG 481 Query 391246 ATGaattaaaaatacaaattgagagaaagccatataaatttccaaaaataaacattaaaa 391305 | | |||||| ||| |||| |||| || ||| ||| || ||||| || |||||| Sbjct 480 AGCCAATAAAAAAGCAACTTGAAAGAACACCTTATCCATTCCCTAAAATTAAATTTAAAA 421 Query 391306 a-tacatataCTTCAATAGAT-GAATATAGTATATG-TGA-TATAGACATTATAAATTAT 391361 | | | |||| || || | || | | || || ||| | || || | ||||||| Sbjct 420 AGGAAAAATACGACAGTATCTACGATTTTGAATTTGATGATTTTATAC-TAGAAAATTAT 362 Query 391362 GAATATCACCCTTCAATAAAAATGGAAATG 391391 ||| ||| || | ||||||||||| ||| Sbjct 361 GAAAGTCATCCAACTATAAAAATGGATATG 332 >seq256 Length=67767 Score = 141 bits (156), Expect = 3e-28 Identities = 271/396 (68%), Gaps = 10/396 (3%) Strand=Plus/Minus Query 378117 TGGATCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTAC 378176 || |||||||||||| ||||||||| | || || | || |||| ||| ||||| || Sbjct 29350 TGCATCAAATCCATCTTCTCCATATAAAAACTGGAATATATTATTATTACCATTTCTAAC 29291 Query 378177 AGTCATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATA 378236 | | ||||||| || |||||||||| || | ||||| || ||| || Sbjct 29290 ACTACCATCATATGCAATAGAACAATCTTCTAAACTCTTGACAAGTCTTCTTTGAATGTA 29231 Query 378237 ACCAGTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATG 378296 |||||||| | ||||||| | ||||||||| || || | | ||| ||||||| ||| Sbjct 29230 ACCAGTTTCAGATGTTTTAATCGAAGTATCAATCAATCCTTCTCTACCTCCCATTGTATG 29171 Query 378297 GAAGAATAATTCAGTAGGAGTAAGTCCACCAATAAATGA--ACTCTCAATAAATCCTCTT 378354 ||| |||||||| |||| | | || || ||||| | | | || | ||| ||||| Sbjct 29170 GAAAAATAATTCTTCAGGAATTAATC--CCGATAAAAAACTATTTTCTACAAAACCTCTA 29113 Query 378355 GCGCCTGGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATAT 378414 | || | |||| ||| | | |||| ||||||||||| | | || ||| | Sbjct 29112 CTTTCAGGGCCGTGATCACCTTTAGAAAAATGTGGTAATGTACGTTCATTGAATCCAAAC 29053 Query 378415 GGAATTCGTTTTCCATCAACATTCTGTTGACCAA---GTGCAGAAACCATTTGAGCAATA 378471 || |||| ||| || |||||||||||||| |||| ||| | || ||||| |||| Sbjct 29052 GGTATTCTTTTACCTTCAACATTCTGTTGTCCAACACATGCTGTTAC---TTGAGAAATA 28996 Query 378472 TTTAAATCACTACCTTTAGACCCAGCATTAACCATA 378507 |||| | | ||||||| ||||| ||||||| Sbjct 28995 TTTATAAAAGAACCTTTACTACCAGCTAAAACCATA 28960 >seq56 Length=107489 Score = 138 bits (152), Expect = 3e-27 Identities = 330/493 (67%), Gaps = 11/493 (2%) Strand=Plus/Minus Query 202381 AGATAATATATTCCAGTTTTTAGTCCTTGTTTCCAACTATAAAAATGCATATTTGTTAA- 202439 |||||||| |||||||| |||| | || ||| | ||||||||||||| | || | Sbjct 14033 AGATAATACATTCCAGTCTTTAATTGTTTTTTGTGTCCATAAAAATGCATACTAGTAAGC 13974 Query 202440 --TGATTTTGCAGTTGGATCTTCCATCCAAAGATTTAAACTTTGCGATTGACAAATATAA 202497 ||| | || | || | || || ||| ||| | | ||| |||||| || ||| Sbjct 13973 TGTGAATATGTGGGTGTAGCT---ATAAAAATATTAAGAGATTGTGATTGATCAACATAT 13917 Query 202498 GCTCCTCTATCTCTAGACATATCTATAAGATTTTTCATTGGTATCTCCCAAACAATTTTA 202557 | | |||||| || | ||||| || | ||||||| || ||||| | || || Sbjct 13916 GGTGTTCTATCAGCAGCTAAATCTAAAATAGATTTCATTTTTAATTCCCATGCTGTTCTA 13857 Query 202558 TATTTTTCTTTTAGTCGTTTTGGTATAGTGTCGATATATTGAATACTACCTTTATTCTGA 202617 || | ||| | | ||||||||||| || |||| ||| ||| ||| | |||||| Sbjct 13856 TACAAATATTTAATTTCTTTTGGTATAGCTTCTATATCTTGGATAGAACCATCGTTCTGA 13797 Query 202618 ATTATATTGTTTTTAATTGAATCATCCCAAATACCTAAATT--AATAAGATCATTAATTA 202675 | || |||||| ||| | || ||| | | ||| || | ||| ||| ||||||| Sbjct 13796 ACTACTAGGTTTTTTATTTCTTTATTCCAGAGAT-TAAGTTTTAGTAA-ATCTTTAATTA 13739 Query 202676 AATATTTATTAACAATAATAAACTCACCAGCTAGTGTTCTTCTTGAATAAATATTACTTG 202735 |||| ||| |||| ||| || ||||||| |||||||| | ||||||||| | Sbjct 13738 AATAAGAATTTACAACTTGAAAATCTCCAGCTAAAGTTCTTCTGGTATAAATATTTGAAG 13679 Query 202736 TAAATGGTTCAAAACATTCATTATTACCTAAAATTTGACTGGTACTAGCAGTTGGCATAG 202795 | || ||||| | |||||||||| ||| |||||||| ||| || || |||||| Sbjct 13678 TTAAAGGTTCTATACATTCATTAAAACCCAAAATTTGGGATGTAGATGCTGTAGGCATAA 13619 Query 202796 GTGCAACTAGTAAACTATTGCGAAGCCCATATTCTTTAATACTATGTTTAAGAGTATTCC 202855 ||||| | ||| ||| | || |||| | ||| || | | | | | | ||| || Sbjct 13618 CAGCAACAAATAATGAATTTCTAACTCCATGCTTTTTGATTTTTTCTCTCAAAATATCCC 13559 Query 202856 AATCATAATTAAT 202868 |||| |||| ||| Sbjct 13558 AATC-TAATAAAT 13547 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 206543 CTCTAATATTATGTATATGTAATCCAATTCCTCCTGCCCATTTTGAAATATTAGCACATT 206602 |||| | |||||| |||| | ||| | |||||||| | ||| || ||| |||||| | Sbjct 12589 CTCTCACATTATGAATATTAATTCCTAGACCTCCTGCACTTTTAGATATAAGAGCACAGT 12530 Query 206603 CTTTTAATGTATTATAAATTCCATCAACACTATCACTTTCCATAGCAATTAAAAAACAAG 206662 ||| | |||| | || || || | | ||| || ||| | | | |||||| | Sbjct 12529 TTTTCACAGTATCGAATATACCTTCTATAGAATCCTCTTTGATATCCAAAAGAAAACATG 12470 Query 206663 AACTTAATTG--TGGTCGTGGCGTTCCAGCATTAAATAAAGTAGGAGTAGCATGTGTAAA 206720 |||| ||||| | || | | |||| | |||||| || ||||| || || || |||| Sbjct 12469 AACTCAATTGATTATTCTTTG--TTCCGGAATTAAACAATGTAGGTGTTGCGTGAATAAA 12412 Query 206721 ATATTTTTGAGACATTAAATTATAAGT 206747 |||||||| ||||||||||||||| || Sbjct 12411 ATATTTTTTAGACATTAAATTATACGT 12385 Score = 91.5 bits (100), Expect = 4e-13 Identities = 170/241 (71%), Gaps = 14/241 (6%) Strand=Plus/Minus Query 203214 ATGATATATAGTTTTAAAAATAT--TAATGTTAATCTTTTTTGCTTCATCACTTTCAAAT 203271 || ||| ||||||| ||||| | | || ||||| | | ||||| ||||| |||||| Sbjct 13428 ATAATAAATAGTTTCGAAAATTTGCTTAT-TTAATAATCTA-GCTTCTTCACTATCAAAT 13371 Query 203272 GGTAAATCTAATAATAC-AAATACATCAGCTAATCCTTGTACTCCAATACCAATTGGTCG 203330 || | ||| | |||| ||||||||| ||||||||||| || |||||||| || |||| Sbjct 13370 GGCAT-TCTTAGAATAATAAATACATCGGCTAATCCTTGAACACCAATACCCATAGGTCT 13312 Query 203331 ATGATTTAAATTACTGCGTTTAGTCTTTTCTGTTGGATAAAAATTGATATCAATAATCTT 203390 ||| | | |||||| |||||| | |||| |||||| | | || || | | | Sbjct 13311 ATGTCTCATATTACTTTTTTTAGTTTCTTCTACTGGATATTTTGTTCTGTCTATTACCCT 13252 Query 203391 ATTTAAATTTTCTGTTACAA----TTTTAGTAACACTATGTAATTTTTCATAATCAAATT 203446 || ||||||| |||||| ||||| || | || | || |||| ||||||||| Sbjct 13251 ATCCAAATTTT---TTACAAGAACTTTTACTATCTCT-TTTAGTTTTATGAAATCAAATT 13196 Query 203447 T 203447 | Sbjct 13195 T 13195 >seq333 Length=161685 Score = 116 bits (128), Expect = 1e-20 Identities = 199/294 (68%), Gaps = 3/294 (1%) Strand=Plus/Minus Query 54827 TGGCAAGCAACAATTATGGGACCAGAAGATACCCCGTATCAAGGTGGTATATTTGAGTTA 54886 ||| |||| || ||||| || || | || || ||||||| ||| |||||| | ||| Sbjct 136516 TGGGAAGCCACTATTATAGGTCCTCCTGGCACACCATATCAAGATGGAATATTTCAATTA 136457 Query 54887 AGAATTGATTTTCCACAAGATTATCCATTTAAACCTCCAAATGTAGTTTTTACTACAAAG 54946 ||| | ||| ||||||||||| | || || || || || | |||| Sbjct 136456 GAGATTATACTCCCAGCTAATTATCCATTTCATCCACCTAAAGTGACATTCAAAACAAGA 136397 Query 54947 ATTTATCATTGTNNNNNNNNNNNNNNNNNNNNNATATGTTTAGATATATTAAAAGATCAA 55006 |||||||||||| |||||||||||||| |||||| | || Sbjct 136396 ATTTATCATTGTAATATAAAGGATGGTCAA---ATATGTTTAGATATTTTAAAAAACGAA 136340 Query 55007 TGGAGTCCTGCACTTACTACTAGTAAGATATTATTAAGTATATGTTCATTAATGAATGAT 55066 |||||||||||||| || | | ||| | |||||| ||||| || ||| | ||||| Sbjct 136339 TGGAGTCCTGCACTCACAGTTGGAAAGGTGTTATTATCTATATCATCTTTATTACATGAT 136280 Query 55067 CAGAATCCCAATGATCCTTTAGATGCAGATGCTGCTGAATTATATTTAAAAAAT 55120 ||||| || |||||||| |||||||| ||||| || ||||| |||||||| Sbjct 136279 GCCAATCCTAAAGATCCTTTGGATGCAGAGGCTGCAGATTTATACATAAAAAAT 136226 >seq156 Length=91491 Score = 111 bits (122), Expect = 5e-19 Identities = 260/385 (68%), Gaps = 17/385 (4%) Strand=Plus/Plus Query 266976 GGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACGATTATT--CC-- 267031 || ||||||||| |||| | || || ||||||||| | ||| ||||| | || Sbjct 24721 GGTGATAAATTTAGTAGTAGACATGGTCAAAAAGGTG----TTGTAGGATTAATAGCCAA 24776 Query 267032 TGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCTCA 267091 | ||||||||||||||||| |||||||||||| ||| ||| |||| || |||||||| Sbjct 24777 TCCAGAAAATATGCCATTTACTGAAGATGGAATAGTACCCGATCTTATAATGAATCCTCA 24836 Query 267092 TGCTATTCCTAGTCGTATGACAATTGGTCAATTAAAAGAGACACTT-TTA--GGAAAAGT 267148 || | |||| | |||||| | || || | ||| |||| ||| ||||| | Sbjct 24837 TGGTTTTCCATCAAGAATGACAGTCGGAAAAATTTTAGA---ACTTATTAATGGAAAGGC 24893 Query 267149 TTTATTAGAATTAGGTTTATTTGGTGATGGTACTAGTTTTGGTGAATTTAATATAAAAGA 267208 | ||| | | | | | || |||| ||| |||| |||| ||| | | || Sbjct 24894 TGCATT-GTTTAAAG--GAATTCAAGATGCTACCGCATTTGCTGAAAATAAAACAGAATC 24950 Query 267209 TATTTGTAAAGAATTACAAAATATTGGTTATGAATCTAAAGGTAATGAAATATTATATGA 267268 || ||||| ||| | | | ||| ||| | | | || || || ||||| ||| Sbjct 24951 AATATGTAATATTTTAAGAGAAAATGGATATAATTATTCTGGCAAGGATGTATTAATTGA 25010 Query 267269 TGGATTATCTGGTGAACAGATGAGAACAAATGTATTTATCGGGCCAGCATTTTATCAAAG 267328 |||| || |||| ||| |||| | ||||||| | || || | ||||||||||| Sbjct 25011 TGGAATAACTGGGGAAGTAATGAAAGTGTATGTATTCTTTGGTCCTGTATTTTATCAAAA 25070 Query 267329 ATTAAAACATATGGTTAGTGATAAA 267353 |||||| ||||||||| ||||||| Sbjct 25071 ATTAAAGCATATGGTTGCTGATAAA 25095 Score = 89.7 bits (98), Expect = 2e-12 Identities = 194/285 (68%), Gaps = 8/285 (3%) Strand=Plus/Plus Query 266325 ATTCCATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAA 266384 ||||| ||||| | ||||||||| | ||| | || |||||||| || ||||||||| Sbjct 24112 ATTCCTTTTCCTCATCATAATCAATCGCCTAGAAATACGTATCAATGCGCTATGGGTAAA 24171 Query 266385 CAGGCTATGGGTA-TCTATGTTACAAATTTTAATAATAGAATGGATAAAACAG---CATA 266440 ||||| ||||||| | || |||| ||| ||||||||| | ||| | |||| | | Sbjct 24172 CAGGCAATGGGTATTATAAGTTA-TAATCAGAATAATAGATTTGAT-ACACAGTTAAACA 24229 Query 266441 TGTTCATACTTATGGTATGAGACCTTTAGTAGATACTCGTGTAATGAATTTACTAAATTT 266500 || | ||||| | | |||||||||| ||| || || || ||||||| Sbjct 24230 CTTTGGT--TTATGCTCAGCGACCTTTAGTTTCTACGGAAACAACAAAGATAGTAAATTT 24287 Query 266501 ACATAAAATTCCATCTGGTGCACAAGTAATAGTAGCTATTATGACACATACTGGGTATAA 266560 ||||| ||||| | || | | | || |||| | ||| || || |||| ||| | Sbjct 24288 CGATAAACTTCCAGCAGGACAAAATGCTATGATAGCGGTAATGTCATATTCTGGATATGA 24347 Query 266561 TCAAGAAGATAGTATATTATTTAATAAAGGATCTATTGAAAGAGG 266605 | |||||| ||| | || ||||||| ||| | |||||||| Sbjct 24348 TATTGAAGATGCAATAATTTTGAATAAAGCATCAGTAGAAAGAGG 24392 Score = 84.2 bits (92), Expect = 7e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 251155 TTCTAATAATTGTCCAATGGTCATTCTACTAGGCAATGCGTGTGGATTAATAATAATATC 251214 |||||| | || ||| | |||||||| || || | || ||||| || |||| ||| Sbjct 24876 TTCTAAAATTTTTCCGACTGTCATTCTTGATGGAAAACCATGAGGATTCATTATAAGATC 24817 Query 251215 TGGACGAATTCCATCTTCAGTAAAAGGCATATTTTTCTCATCAATAACTAAACCAATAGT 251274 || ||||||||||||||||| |||||||||| || | ||| || | | Sbjct 24816 GGGTACTATTCCATCTTCAGTAAATGGCATATTTTCTGGATTGGCTATTAATCCTACAAC 24757 Query 251275 ACCTTTTTGTCCACATCTACTACAAAACTTATCTCCAATTGCAGGAATTCT 251325 ||||||||| ||| |||||||| ||| ||||| |||| | || ||||| Sbjct 24756 ACCTTTTTGACCATGTCTACTACTAAATTTATCACCAACCTCTGGGATTCT 24706 >seq405 Length=8842 Score = 96.9 bits (106), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 14/231 (6%) Strand=Plus/Plus Query 267468 CACGGTGCATCTAGATTTAATAAAGAAAGATTACTCGATGCATCAGATAAATTTAAAATC 267527 || || ||||| |||| |||||||||||| |||| |||||| | || | | Sbjct 8266 CATGGAGCATCATTATTTCTTAAAGAAAGATTGTGTGATGTTTCAGATGCTTATAGAGTA 8325 Query 267528 CAAGTATGTAAAAAATGTGGTCTTATTGCTGCTTATA-------ATAACAAAGAGCATAT 267580 ||||||| | |||||| ||| ||| ||| ||| ||||| ||| Sbjct 8326 GCGATATGTAATATATGTGG----ATTACTGGCTATCTCCAACCATAGTAAAGAT--TAT 8379 Query 267581 TCATATATGTAAAACTTGTAATAATACAACAGAATTTAGTAATGTATATTTACCATATGC 267640 | || | |||||| ||||||||||||||| | | || | ||| | | |||||||| Sbjct 8380 T-ATTTCTGTAAAGGATGTAATAATACAACAAAGATAAGCATAGTAGAAGTTCCATATGC 8438 Query 267641 TTGTAAATTATTATTTCAAGAATTAATAACAATGAATATTGCACCAAGAAT 267691 || ||||||||| || |||||||| || |||||||||| ||||||||||| Sbjct 8439 TTTTAAATTATTGTTACAAGAATTGATGGCAATGAATATAGCACCAAGAAT 8489 Score = 84.2 bits (92), Expect = 7e-11 Identities = 127/179 (71%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 266972 AATCGGCGATAAATTTTCTAGTCGCCACGGACAAAAAGGTACCATTGGTACG--ATTATT 267029 ||| || ||||||||| || ||| || ||||| ||||||||||| || | | |||| Sbjct 7770 AATAGGAGATAAATTTGCTTCTCGACATGGACAGAAAGGTACCATAGGAATGACATTAAG 7829 Query 267030 CCTGAAGAAAATATGCCATTTAATGAAGATGGAATTAGACCTGATATTATTATTAATCCT 267089 | ||||| | |||||||||| |||| ||| | | ||| ||| | ||||| || || Sbjct 7830 AC--AAGAAGAAATGCCATTTACCAAAGAAGGATTGATACCAGATGTGATTATGAACCCA 7887 Query 267090 CATGCTATTCCTAGTCGTATGACAATTGGTCAATTAAAAGAGACACTTTTAGGAAAAGT 267148 ||||| |||| | ||| | ||||| || |||| ||| | ||||||||||| Sbjct 7888 CATGCATTTCCATCAAGAATGTCCATTGGACATTTAATAGAATGTTTATTAGGAAAAGT 7946 >seq278 Length=64959 Score = 89.7 bits (98), Expect = 2e-12 Identities = 267/401 (67%), Gaps = 27/401 (7%) Strand=Plus/Plus Query 67000 GATGGTTCTAAAACT---AAATCAATTCGTGGTATTCCTAAATTAATAGATGCAAATTTT 67056 ||||||||||||| | | || ||| | | |||| || ||| |||||| || Sbjct 10201 GATGGTTCTAAAAATGTTAGAT--ATTTG-GATATTGAAAAGTTAGAAGATGCTAACAGA 10257 Query 67057 GCAGGAACAGCTAAATCTGGTCAATGTACACTAATATTATGTGAGGGAGATTCAGCTAAA 67116 |||||||| | | | ||| |||| | |||| ||| || |||||||||||||| Sbjct 10258 GCAGGAACTGTTGATTCTTACAAATGCTCTTTAATTTTAACAGAAGGAGATTCAGCTAAG 10317 Query 67117 GCTGGTATTGTATCTGGTCTAACAAGAGAAGATAGAAAT-ATTATTGGCGTTTATCCTAT 67175 | | || | || ||| || | || | | || ||||| || || | |||| | Sbjct 10318 ACATTTGTTATGTCAGGTATAGGTCTTGTAGGAAAAGATCATTAT-GGTGTATTTCCTTT 10376 Query 67176 GAAAGGTAAATTATTAAATGTAAGAGGGGAACCACTCTCTAAAA--TTGGAGGTAATAAA 67233 |||||||||| | ||||||||| ||| | | ||| | || | || | |||||| Sbjct 10377 GAAAGGTAAACTTTTAAATGTACGAGAAG--CTTCTCACAAACAGATTATGGAAAATAAA 10434 Query 67234 GAAATCACTGAAATTAAACAAATCTTAGGATTAGAACACGGTAAAGAATATACTGAAAAA 67293 ||| | | | |||||| |||| |||||||| |||| |||||||||| | ||| Sbjct 10435 GAATTGATAAATATTAAAAAAATAATAGGATTAAAACAAGGTAAAGAAT------ACAAA 10488 Query 67294 GATGTTACTACTAAACTT-CGTTATGGTAAAATCCTTTTTATGACAGATCAAGATTTAGA 67352 |||| || | | || | ||||| | || | ||||||| ||||||||| || Sbjct 10489 GATG----TAAAAGATTTAAGATATGGGCATATTATAATTATGACGGATCAAGATCATGA 10544 Query 67353 TGGTAGTCATATTAAAGGATTAGGTT--TAAATCTCTTTGA 67391 |||| ||||| |||||||| ||| | ||| ||||||| Sbjct 10545 TGGTTCCCATATCAAAGGATT--GTTGATTAATTTCTTTGA 10583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515246207208866