Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001888035.1_202016-12-01] 439 sequences; 5,850,007 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq58 132 6e-26 >seq58 Length=2400 Score = 132 bits (146), Expect = 6e-26 Identities = 315/472 (67%), Gaps = 7/472 (1%) Strand=Plus/Minus Query 104985 GAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAAT 105044 || |||||| |||| |||| || | ||||| |||||||||| ||| |||| || Sbjct 891 GAGAAGAAGATGATCTAGGTCCTGTATATGGTTTTCAATGGAACCATTTCAATGCTCCAT 832 Query 105045 ATATCGACTGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTATAG 105104 || | | ||| | || || || || || ||||| | | || ||| | | |||| Sbjct 831 ATGTTAATTGTAAAACTGATTACACAGGAAAAGGTGTTAATCAGTTACAAAATGCGATAG 772 Query 105105 AAACTATAAAAAATAACCCCGGGTGTCGAAGAATAATTATAGATAGTTGGAATGTGTCAC 105164 | | ||| || || | || || ||||||| |||| | |||||| || Sbjct 771 ATATTATTAAGAAAGATCCAACCAGTAGAAGAATGGTTATTGTCGCATGGAATCCCGAAC 712 Query 105165 AATTATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAGAAATA 105224 ||||| || |||||||||||||| ||||||||||| | |||||||| | ||| Sbjct 711 AATTACGGGAAATGGCTCTTCCACCATGTCATTGTTTATTTCAATTTTATGTCGCTGATA 652 Query 105225 AAATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCAT 105284 | | | ||| ||||| || ||||||||||| | ||| | ||||| || ||||| | Sbjct 651 A---TAAATTAAGTTGTCTTTTATATCAAAGATCCGGTGATATGGGATTGGGAGTACCTT 595 Query 105285 ATAATATTGGTTTCTATTCA-TTTTTGGTGT-GTGTTCTCTCAAAATGGTGTAATCTAAC 105342 |||||||| | |||||| || ||| | | || | | || | || | | || Sbjct 594 TTAATATTGCTAGTTATTCACTTCTTGCTTTAATGGTGGCAAAAGTTACTGGATTAGAA- 536 Query 105343 CCCCGGAAAATTTATTCATACTTTTGGAGATGTTCATGTATATTCTAACCATGTTGACCA 105402 || || ||||||| ||| |||| || ||||||||| ||||| || || |||| | Sbjct 535 -CCAGGTGAATTTATCCATTCTTTAGGTGATGTTCATTTATATGAGAATCACATTGAGCC 477 Query 105403 ATTAAAAATTCAATTAAACAGAAAACCTTACACCTTCCCAAAGGTGAAATTT 105454 | |||||| ||| | | |||| |||||| | ||||| || | |||||| Sbjct 476 AATAAAAAAGCAACTTGAAAGAACACCTTATCCATTCCCTAAAATTAAATTT 425 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658399587012440