Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spraguea_20lophii_20[genbank_20GCA_5F001888035.1_202016-12-01] 439 sequences; 5,850,007 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq235 125 1e-23 >seq235 Length=65598 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 282887 AAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATC 282946 ||| |||| ||| | || |||||| ||||| ||||| ||| | || | ||||| Sbjct 33341 AAGAACCAAATGAAGTGTAGATTCTTTCTGGATATTGTAATCACTCAATGTTCTACCATC 33282 Query 282947 CTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTC 283006 || | |||||| || ||||| ||||| | |||||| || || || || |||||||| Sbjct 33281 TTCCAATTGTTTACCTGCAAATATCAATCTTTGTTGATCTGGAGGTATTCCTTCCTTGTC 33222 Query 283007 TTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGT 283066 ||| || |||||||| || | || || | ||| | | ||||||||| || ||||| || Sbjct 33221 TTGTATTTTTGCTTTGACATTTTCTATGGAGTCGGTGGATTCGACTTCTAGTGTGATTGT 33162 Query 283067 CTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||| ||||| | || || || |||||||||||| Sbjct 33161 CTTGCCCGTAAGCGTTTTGACAAATATCTGCATT 33128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046733312419106