Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq155 158 1e-33 >seq155 Length=106166 Score = 158 bits (174), Expect = 1e-33 Identities = 175/231 (76%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 42955 GTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 43014 |||||||||| || | || ||| || ||||| || |||||||| || | ||||||||| Sbjct 85247 GTCCTCCTCTCAATCTCAGCACTAAGTGCAACGTACTCTCCTTCTGCACGTTGTAATCAC 85306 Query 43015 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCG 43074 ||||| || | || || |||||||| ||||| || || || || ||||| |||| | Sbjct 85307 TAAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTGCTGATCGGGAG 85366 Query 43075 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCC-ACCGTGTCGCTCGATTCC 43133 | | || |||||||||| ||| |||| ||| |||||| | |||||| | || Sbjct 85367 GTATGCCCTCCTTGTCC-TGAATTTTACTTTTCACGTCGCATATCGTGTCTGAAGGCTCT 85425 Query 43134 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || || | ||||||||| |||||||| || ||||||||||||||||||||| Sbjct 85426 ACCTCAAGCGTGATGGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCATT 85476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815384206800