Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq303 122 6e-23 >seq303 Length=146937 Score = 122 bits (134), Expect = 6e-23 Identities = 160/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 34172 AGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGG 34231 ||||| ||||||| ||| | ||||| || ||||||||||| |||||| ||| || | | Sbjct 97411 AGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATGTTATAGTCGCTCAG-TGTCCG 97469 Query 34232 T-CGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTC 34290 | | || || | |||||| || || || |||||||| ||||| ||| || | | ||| Sbjct 97470 TCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGGCGGTATCCCCTC 97529 Query 34291 CTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGT 34350 |||||| |||||| ||||| || | || | |||| |||||| || || | ||| Sbjct 97530 CTTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCGGACGATTCCACCTCGAGCGT 97589 Query 34351 GATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || |||||||| ||||| || || || || || ||||| Sbjct 97590 AATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCAT 97628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070779393600