Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq155 95.1 1e-14 seq303 84.2 2e-11 >seq155 Length=106166 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || |||| ||||| || || | | Sbjct 85475 ATGCAAATCTTTGTAAAGACCCTTACGGGCAAGACCATCACGCTTGAGGTAGAGCCTTCA 85416 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||| |||||||| ||||||||||| || || |||||||| Sbjct 85415 GACACGATATGCGACGTGAAAAGTAAAATTCAGGACAAGGAGGGCATACCTCCCGATCAG 85356 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||| ||||| ||||| ||||| ||| | || ||| || || | ||||||||| Sbjct 85355 CAACGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGACGTACTCTTAGTGATTACAAC 85296 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 | || || || || | || ||||| || ||||| | ||||| Sbjct 85295 GTGCAGAAGGAGAGTACGTTGCACTTAGTGCTGAGATTGAGAGGAGG 85249 >seq303 Length=146937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || ||||| | || || || |||||| | || Sbjct 97628 ATGCAAATATTCGTAAAGACACTCACAGGCAAAACAATTACGCTCGAGGTGGAATCGTCC 97569 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || || | || || || || ||||||||||| || || |||||||| Sbjct 97568 GACACAATCGAAAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCGCCCGATCAG 97509 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 ||||| || |||||||| || || ||| | |||||| Sbjct 97508 CAACGGCTCATATTTGCTGGGAAGCAGCTTGAGGAT 97473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726414215150