Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq168 86.0 1e-11 >seq168 Length=41216 Score = 86.0 bits (94), Expect = 1e-11 Identities = 156/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 177131 CGCATCACGGACATTCAGTAGCTTACCACGGAGGGGGAAAATTCCGTAGCGATCCCGACC 177190 ||| || || || ||||| ||||| || || || || || | |||||| |||| || Sbjct 22732 CGCCTCGCGCACGTTCAGCAGCTTGCCGCGCAGAGGAAACACGCCGTAGTAGTCCCTGCC 22673 Query 177191 CACGACAGCAAGGCCAGCTGTGGCAAGCGTGGCGGCAGAGTCACCCTCTGTCAAAATGAG 177250 || || | ||||| | |||||||||| ||| ||||| ||||| || | |||||| Sbjct 22672 AACCACCGACAGGCCGCTTATGGCAAGCGTCTTGGCCGAGTCTCCCTCGGTGAGAATGAG 22613 Query 177251 CGTGCACATTCCAGAGTGCTTCGTGCCCGCCCACGCGGCATCCGTCAATTTTTTGATACC 177310 || |||| | |||| ||||||||| ||| ||||| ||| |||| || || Sbjct 22612 CGAGCACTTCTGCGAGTTCTTCGTGCCTGCCAGGTTCGCATCGCTCAGCTTTTCTATGCC 22553 Query 177311 CGTGAGTC-GCACCTTCTTCGCACCATCCGTTTTCTTGAGATTCTT 177355 || | | || || ||| | || |||||||||||||| | ||| Sbjct 22552 GGTTATTTTGCTGCT-CTTAGACCCGTCCGTTTTCTTGAGCTGCTT 22508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618828713200