Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq168 125 2e-23 >seq168 Length=41216 Score = 125 bits (138), Expect = 2e-23 Identities = 229/333 (69%), Gaps = 8/333 (2%) Strand=Plus/Minus Query 325322 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 325381 || || || ||| |||| |||||| || ||||||| | || |||||||| ||||| Sbjct 23700 ATGTAACGCGCAGACGCGGCATCCTTGCCGCCCTGCAGGCGCGTGCCGAACTGCCCCTCA 23641 Query 325382 GGCAACAACCAGTTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTC 325441 |||| | | ||||||||| ||||| || || |||| |||||||| || | ||| ||| Sbjct 23640 GGCATGAGCAGGTTGATGTTGTTGCTGCCCACGAAATCGTGTGCAAGTTTGATGATCGTC 23581 Query 325442 CCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAAC 325501 |||||| | | ||||| || || || || ||||| |||||||| || | | Sbjct 23580 TGCTGCAGACTTACCTCGCCGTGATGGTACGCCGAGTGCTCGGCAACGTAGCCCACAAGC 23521 Query 325502 TGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAATATATCACTTTCCGT 325561 ||||||||||| | || | | | || | ||| ||| | || ||||| ||||| Sbjct 23520 TGTGCAACCTTAATCTCTGATTTAAGGTTCCTCTTAAAACAGCAGTACATCACCTTCCGC 23461 Query 325562 TGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGC--- 325618 || || || || || || || || || || ||||| || | | || |||| Sbjct 23460 TGTCCCGGCTTAAACCCGTCCACAACGGAGGGTATGCTGCG---AACGTTGT-CCGCCAT 23405 Query 325619 -GAGAACAAAATAAGTTCCTTGTCGATGAAGTC 325650 ||||||||||| || || |||| ||||||||| Sbjct 23404 AGAGAACAAAATCAGCTCTTTGTTGATGAAGTC 23372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649714560180