Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq303 100 2e-16 >seq303 Length=146937 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 ||||||||||| | | | || || || || ||| || || ||||| || || ||| Sbjct 97399 TTTCCTCCTCTAAGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATGTTATAGTCG 97458 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | || | |||| || | ||||| || |||||||| | || || ||||||||| Sbjct 97459 CTCAGTGTCCGTCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGGC 97518 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 || || || || || || || || || |||||| |||| | ||||| |||| |||| Sbjct 97519 GGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCGGACGATTCC 97578 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || | |||||||| || | || ||||| ||||| ||||| Sbjct 97579 ACCTCGAGCGTAATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCAT 97628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276902810670