Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq155 172 7e-38 seq303 161 1e-34 >seq155 Length=106166 Score = 172 bits (190), Expect = 7e-38 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| || |||||||| || || || ||||| || ||||| ||| | ||| Sbjct 85475 ATGCAAATCTTTGTAAAGACCCTTACGGGCAAGACCATCACGCTTGAGGTAGAGCCTTCA 85416 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| || || | ||| || ||||| || ||||| ||||| || ||||||||| Sbjct 85415 GACACGATATGCGACGTGAAAAGTAAAATTCAGGACAAGGAGGGCATACCTCCCGATCAG 85356 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| ||||| |||||||| || ||||| |||||||||||||| || |||||||||| Sbjct 85355 CAACGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGACGTACTCTTAGTGATTACAAC 85296 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || || |||||| ||| | ||| | || || || Sbjct 85295 GTGCAGAAGGAGAGTACGTTGCACTTAGTGCTGAG 85261 >seq303 Length=146937 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||| || || || || || || || ||||| || || |||||||| || ||||| Sbjct 97628 ATGCAAATATTCGTAAAGACACTCACAGGCAAAACAATTACGCTCGAGGTGGAATCGTCC 97569 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||||||||| || | || || ||||| || || ||||| || || || ||||||||| Sbjct 97568 GACACAATCGAAAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCGCCCGATCAG 97509 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||||| || || |||||||| || |||||||| |||||||| || || || || ||| Sbjct 97508 CAACGGCTCATATTTGCTGGGAAGCAGCTTGAGGATGGACGGACACTGAGCGACTATAAC 97449 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 | || |||||| ||| || ||| | || || |||||| | || || Sbjct 97448 ATACAGAAGGAGAGTACGCTGCACTTGGTGCTCAGGCTTAGAGGAGG 97402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657859850783200