Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq303 122 8e-23 seq155 91.5 1e-13 >seq303 Length=146937 Score = 122 bits (134), Expect = 8e-23 Identities = 155/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || || ||||| ||||||||||| || ||| | || Sbjct 97628 ATGCAAATATTCGTAAAGACACTCACAGGCAAAACAATTACGCTCGAGGTGGAATCGTCC 97569 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| ||||| ||||| || ||||| || || ||||| |||||||| Sbjct 97568 GACACAATCGAAAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCGCCCGATCAG 97509 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 ||||| | || ||||| ||||| ||||| ||||| | || ||| || || ||||| Sbjct 97508 CAACGGCTCATATTTGCTGGGAAGCAGCTTGAGGA-TGGACGGACACTGAGCGACTATAA 97450 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTG 24913 ||| || ||||| || || ||||||||| Sbjct 97449 CATACAGAAGGAGAGTACGCTGCACTTGGTG 97419 >seq155 Length=106166 Score = 91.5 bits (100), Expect = 1e-13 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| |||||| | || || || || || || || || ||||| || ||||| | | Sbjct 85475 ATGCAAATCTTTGTAAAGACCCTTACGGGCAAGACCATCACGCTTGAGGTAGAGCCTTCA 85416 Query 24764 GACACAGTA-GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| || | ||| |||| ||| || || ||||| || || |||||||||||||| Sbjct 85415 GACACGATATGCGACGTGAAAAGTAAA-ATTCAGGACAAGGAGGGCATACCTCCCGATCA 85357 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCA--GATTAT 24880 ||||| | |||||||| || || ||||| || || | || || | | | ||||| Sbjct 85356 GCAACGGCTTATCTTTGCTGGCAAGCAGCTCGAAGA-TGGACGTAC-TCTTAGTGATTAC 85299 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| | || ||||| || | ||||| ||| || ||||| | ||||| Sbjct 85298 AACGTGCAGAAGGAGAGTACGTTGCACTTAGTGCTGAGATTGAGAGGAGG 85249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449895856646800