Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq155 127 1e-24 seq303 100 2e-16 >seq155 Length=106166 Score = 127 bits (140), Expect = 1e-24 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 34738 TATCCAATCATTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAAT 34797 |||| || || |||||| ||||| ||||| || | ||| | || ||||||||||| | Sbjct 85236 TATCTAAACACGTCCTCCTCTCAATCTCAGCACTAAGTGCAACGTACTCTCCTTCTGCAC 85295 Query 34798 GTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTG 34857 ||| || || || | || |||| || || ||||| || || ||||| || ||||| Sbjct 85296 GTTGTAATCACTAAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTG 85355 Query 34858 CTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTC 34917 ||| || | || | ||||||||||| | ||||| ||| ||| ||||| || Sbjct 85356 CTGATCGGGAGGTATGCCCTCCTTGTCCTGAATTTTACTTTTCACGTCGCATATCGTGTC 85415 Query 34918 ATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||| || |||| || |||||||| ||||| ||||||||||||||||| ||||| Sbjct 85416 TGAAGGCTCTACCTCAAGCGTGATGGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCAT 85475 >seq303 Length=146937 Score = 100 bits (110), Expect = 2e-16 Identities = 165/234 (71%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| || | ||| || |||| ||| | || ||||||||||| ||||||||||| Sbjct 97399 TTTCCTCCTCTAAGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATGTTATAGTCG 97458 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 || | || |||| || || ||||| || || || || || |||||||| || || Sbjct 97459 CTCAGTGTCCGTCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGGC 97518 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATT-CATTGGCC-- 34924 || | |||||||||||| | ||| || || || || | |||||| | || | Sbjct 97519 GGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTAC--AT--TTTCGATTGTGTCGGACGA 97574 Query 34925 -TCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | || || || || || ||||| |||||||| || || ||||| Sbjct 97575 TTCCACCTCGAGCGTAATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCAT 97628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325691569491890