Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq155 86.0 6e-12 >seq155 Length=106166 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || |||||||||||||| || | || ||||| ||||| |||||||| ||||| |||||| Sbjct 85321 TCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTGCTGATCGGGAGGTATGCCCTCCTTG 85380 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCA-ACCGTGTCGGTGGGCTCCACGTCGACGGTGAC 133624 || ||| ||| || | | || | |||||| | ||||| || || | |||| Sbjct 85381 TC-CTGAATTTTACTTTTCACGTCGCATATCGTGTCTGAAGGCTCTACCTCAAGCGTGAT 85439 Query 133625 GGTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||| ||||| || || || ||||| || || ||||| Sbjct 85440 GGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCAT 85475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418926744400