Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq155 86.0 6e-12 >seq155 Length=106166 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | |||||||| || | || || || | |||||| | || || || ||| | Sbjct 85475 ATGCAAATCTTTGTAAAGACCCTTACGGGCAAGACCATCACGCTTGAGGTAGA-GCCTTC 85417 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || | || ||| |||||| || || ||||| ||||| |||||||| Sbjct 85416 AGACACGATATGCGACGTGAAAAGTAAAATTCAGGACAAGGAGGGCATACCTCCCGATCA 85357 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 |||| | || || | | ||||| || |||||||||| | | | | || |||||||| Sbjct 85356 GCAACGGCTTATCTTTGCTGGCAAGCAGCTCGAAGATGGACGTACTCTTAGTGATTACAA 85297 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGGA 25402 | || || || || | || |||||| | ||||||||||||||| Sbjct 85296 CGTGCAGAAGGAGAGTACGTTGCACTTAGTGCTGAGATTGAGAGGAGGA 85248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445092675259200