Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq303 125 6e-24 seq155 104 2e-17 >seq303 Length=146937 Score = 125 bits (138), Expect = 6e-24 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 35504 TTATTTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAA 35563 || ||||| || | | ||| | |||||| || | |||||||||||| || ||||| || Sbjct 97396 TTCTTTCCTCCTCTAAGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATGTTATAG 97455 Query 35564 TCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCC 35623 ||| || || || | || || |||||||| || |||||||| | ||| ||||| || Sbjct 97456 TCGCTCAGTGTCCGTCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCG 97515 Query 35624 GAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGAT 35683 | || | | |||||||||| ||||| ||| | | || | | |||||| |||| Sbjct 97516 GGCGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCGGACGAT 97575 Query 35684 TCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 |||||||| | ||| || ||||| || || | || || || ||||| |||||| Sbjct 97576 TCCACCTCGAGCGTAATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCATT 97629 >seq155 Length=106166 Score = 104 bits (114), Expect = 2e-17 Identities = 161/222 (73%), Gaps = 6/222 (3%) Strand=Plus/Plus Query 35519 AACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAG-GTTCG 35577 || |||| ||| || || |||||||||||||| || | ||||||||| | ||| || || Sbjct 85258 AATCTCAGCACTAAGTGCAACGTACTCTCCTTCTGCACGTTGTAATC-ACTAAGAGTACG 85316 Query 35578 CTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTC 35637 | || || |||||||| || ||||| || | ||| ||||| || | ||| | || ||| Sbjct 85317 TCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTGCTGATCGGGAGGTATGCCCTC 85376 Query 35638 CTTGTCCATGATCTTTTGCTTCAGA-GTTGC-CACCGTGTCGCTCGATTCCACCTCCACC 35695 ||||||| ||| |||| ||| | || || | |||||| | || ||||| | | Sbjct 85377 CTTGTCC-TGA-ATTTTACTTTTCACGTCGCATATCGTGTCTGAAGGCTCTACCTCAAGC 85434 Query 35696 GTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| || || ||||| | || || ||||| || |||||| Sbjct 85435 GTGATGGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCATT 85476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450791853174800