Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq303 136 4e-27 seq155 102 8e-17 >seq303 Length=146937 Score = 136 bits (150), Expect = 4e-27 Identities = 176/243 (72%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 134483 CTTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC 134542 |||||||||||| || | | ||| | ||| ||||| ||||| || ||||| ||||| Sbjct 97398 CTTTCCTCCTCTAAGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATGTTATAGTC 97457 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || | || | || || ||||| || || ||||| || | || ||||||||||| Sbjct 97458 GCTCAGTGTCCGTCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGG 97517 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 |||||| || || || || || || || || || || | ||||||||||||||| Sbjct 97518 CGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCGGACGATTC 97577 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTTTT 134722 ||| ||||| ||||| ||||| || || | || || ||||| |||||||||| | ||| Sbjct 97578 CACCTCGAGCGTAATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCATTTGCTCTTT 97637 Query 134723 GTT 134725 ||| Sbjct 97638 GTT 97640 >seq155 Length=106166 Score = 102 bits (112), Expect = 8e-17 Identities = 160/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 134486 TCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC 134545 ||||||||| | || || ||| | ||| | ||| ||||| || | |||||| || | Sbjct 85248 TCCTCCTCTCAATCTCAGCACTAAGTGCAACGTACTCTCCTTCTGCACGTTGTAATCACT 85307 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || || | || |||||||| ||||| ||||| || | || ||||||||||| || Sbjct 85308 AAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTGCTGATCGGGAGG 85367 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 |||||| || || || |||||||| ||| || || | ||||| || | || || Sbjct 85368 TATGCCCTCCTTGTCCTGAATTTTACTTTTCACGTCGCATATCGTGTCTGAAGGCTCTAC 85427 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 || || || ||||| || || || | || || || || ||||||||| Sbjct 85428 CTCAAGCGTGATGGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCATT 85476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396441581200