Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq303 122 3e-22 seq155 116 1e-20 >seq303 Length=146937 Score = 122 bits (134), Expect = 3e-22 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || ||| ||| || || || ||||| || | ||| || ||||| |||| Sbjct 97422 CAAG-TGCAGCGTACTCTCCTTCTGTATGTTATAGTCGCTCAGTGTCCGTCCATCCTCAA 97480 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || |||||||| || || ||||||||||| || || || || || || ||||| | Sbjct 97481 GCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGGCGGTATCCCCTCCTTGTCCTGTA 97540 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || |||||||| || || | || || | ||| || || || |||| ||| || | Sbjct 97541 TCTTCGCCTTTACATTTTCGATTGTGTCGGACGATTCCACCTCGAGCGTAATTGTTTTGC 97600 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | || ||||| ||||| || || |||||| Sbjct 97601 CTGTGAGTGTCTTTACGAATATTTGCATT 97629 >seq155 Length=106166 Score = 116 bits (128), Expect = 1e-20 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 140520 AATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGC 140579 ||||| || || | || | ||| ||| || || | || |||||| | || || Sbjct 85258 AATCTCAGCACTAAGTGCAACGTACTCTCCTTCTGCACGTTGTAATCACTAAGAGTACGT 85317 Query 140580 CCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCT 140639 |||||||| || || || ||||||||||| || ||||||||||| ||||| || || || Sbjct 85318 CCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTGCTGATCGGGAGGTATGCCCTCC 85377 Query 140640 TTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTA 140699 || |||||||||||| ||| || | |||| || || || || || ||||| || Sbjct 85378 TTGTCCTGAATTTTACTTTTCACGTCGCATATCGTGTCTGAAGGCTCTACCTCAAGCGTG 85437 Query 140700 ACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 | ||||| || || || || |||||||| || |||||| Sbjct 85438 ATGGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCATT 85476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515248381598930