Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq155 132 1e-25 seq303 129 1e-24 >seq155 Length=106166 Score = 132 bits (146), Expect = 1e-25 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 210923 CTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAA 210982 ||| || || | ||| ||||| ||| || | ||||||||| ||||||||||| || || Sbjct 85284 CTCCTTCTGCACGTTGTAATCACTAAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAA 85343 Query 210983 GATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTT 211042 |||||| ||||| || || ||||| | || ||||||||||| || || |||||||| Sbjct 85344 GATAAGCCGTTGCTGATCGGGAGGTATGCCCTCCTTGTCCTGAATTTTACTTTTCACGTC 85403 Query 211043 TTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTAC 211102 || ||||| || || ||||| || ||||| ||||| ||||| || |||||||| Sbjct 85404 GCATATCGTGTCTGAAGGCTCTACCTCAAGCGTGATGGTCTTGCCCGTAAGGGTCTTTAC 85463 Query 211103 AAACACCTGCATT 211115 ||| | |||||| Sbjct 85464 AAAGATTTGCATT 85476 >seq303 Length=146937 Score = 129 bits (142), Expect = 1e-24 Identities = 161/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210896 AAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCT 210955 ||| || || || | ||| || || ||| || || |||||||| || || |||| Sbjct 97410 AAGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATGTTATAGTCGCTCAGTGTCCG 97469 Query 210956 TCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTC 211015 |||||| || |||||||| || || || || || ||||| || || || || | || || Sbjct 97470 TCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGGCGGTATCCCCTC 97529 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGT 211075 ||||||||| ||||| || || |||||||| ||||| || ||| |||||||| || Sbjct 97530 CTTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCGGACGATTCCACCTCGAGCGT 97589 Query 211076 GATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTT 211116 || || || || ||||| |||||||| || | ||||||| Sbjct 97590 AATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCATTT 97630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159147395993150