Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq303 122 2e-22 seq155 114 3e-20 >seq303 Length=146937 Score = 122 bits (134), Expect = 2e-22 Identities = 123/160 (77%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || |||||||||||||| || || || ||||| || |||||||| || || ||| Sbjct 97471 CCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGCTGATCGGGCGGTATCCCCTCC 97530 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| || ||||| ||| ||| |||||| ||||| || | |||||| || | ||| Sbjct 97531 TTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCGGACGATTCCACCTCGAGCGTA 97590 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTT 225715 || || ||||| || | || |||| ||| | |||||||| Sbjct 97591 ATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCATTT 97630 >seq155 Length=106166 Score = 114 bits (126), Expect = 3e-20 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 225523 TCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAG 225582 || || || || |||||||| | ||| | |||||||| |||||||| ||||| ||| Sbjct 85285 TCCTTCTGCACGTTGTAATCACTAAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAG 85344 Query 225583 ATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCT 225642 ||||| ||||| || ||||| || || || |||||||| || || ||| ||| || | Sbjct 85345 ATAAGCCGTTGCTGATCGGGAGGTATGCCCTCCTTGTCCTGAAT--TTTACTTTTCA-CG 85401 Query 225643 TCG---ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTT 225699 ||| || |||||||| | || || || | |||||| ||||||||||| | || ||| Sbjct 85402 TCGCATATCGTGTCTGAAGGCTCTACCTCAAGCGTGATGGTCTTGCCCGTAAGGGTCTTT 85461 Query 225700 ATGAACACTTGCATT 225714 | || | ||||||| Sbjct 85462 ACAAAGATTTGCATT 85476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192526463415140