Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trachipleistophora_20hominis_20[genbank_20GCA_5F000316135.1_202013- 01-04] 310 sequences; 8,498,182 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq303 152 4e-32 seq155 114 9e-21 >seq303 Length=146937 Score = 152 bits (168), Expect = 4e-32 Identities = 177/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 44099 TTTTATTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATG 44158 |||| ||| |||| ||||| || || | ||||| ||| ||||| |||||||| || ||| Sbjct 97390 TTTTTCTTCTTTCCTCCTCTAAGCCTGAGCACCAAGTGCAGCGTACTCTCCTTCTGTATG 97449 Query 44159 TTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGC 44218 || || ||| ||| || | || || ||||||||||| ||||| || | || ||| Sbjct 97450 TTATAGTCGCTCAGTGTCCGTCCATCCTCAAGCTGCTTCCCAGCAAATATGAGCCGTTGC 97509 Query 44219 TGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCG 44278 ||||| | || | || ||||| ||| ||||||| ||| | || | || |||||| Sbjct 97510 TGATCGGGCGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTTTCGATTGTGTCG 97569 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||||||||| | |||||| || || || ||||| ||||| ||||| |||||||| Sbjct 97570 GACGATTCCACCTCGAGCGTAATTGTTTTGCCTGTGAGTGTCTTTACGAATATTTGCAT 97628 >seq155 Length=106166 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 44110 TCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC 44169 ||| ||||||| ||||| ||| | ||| | ||| |||||||| || | ||||||||| Sbjct 85248 TCCTCCTCTCAATCTCAGCACTAAGTGCAACGTACTCTCCTTCTGCACGTTGTAATCACT 85307 Query 44170 GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGG 44229 || || | || || |||||||| || |||||||| | || |||||||| | ||| Sbjct 85308 AAGAGTACGTCCATCTTCGAGCTGCTTGCCAGCAAAGATAAGCCGTTGCTGATCGGGAGG 85367 Query 44230 CACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCAC 44289 | || ||||| ||| || || |||| | ||| ||||| | | || || Sbjct 85368 TATGCCCTCCTTGTCCTGAATTTTACTTTTCACGTCGCATATCGTGTCTGAAGGCTCTAC 85427 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | ||| || ||||| ||||| |||||||| || ||||||||||| Sbjct 85428 CTCAAGCGTGATGGTCTTGCCCGTAAGGGTCTTTACAAAGATTTGCAT 85475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989039911270