Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq57 93.3 4e-14
seq13 86.0 5e-12
>seq57
Length=32437
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 20948 TCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGC 21007
||| || | |||||| ||||| | |||||| || |||||| || ||||| || ||
Sbjct 25890 TCCTCCCCTCAGCCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACT 25949
Query 21008 CAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGG 21067
||| | | | ||||| ||||| ||||||||| ||||||| | ||||||||| ||
Sbjct 25950 CAGACTACGTCCATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGG 26009
Query 21068 CACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGT 21127
| ||| |||||||| || || | ||| || | | | || || |||||
Sbjct 26010 AATGCCCTCCTTGTCCTTAATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCGAC 26069
Query 21128 TTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATT 21176
|| | ||||||||||| || || | || || || ||||||||||||
Sbjct 26070 CTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAACGAATATTTGCATT 26118
>seq13
Length=120561
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005
|| || || |||||||||||||||| |||| ||| |||||| || || ||||||||
Sbjct 71736 TTGCCACCCCGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCG 71795
Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065
||| || | | ||||| ||||| ||||||||| | || |||| ||||| ||
Sbjct 71796 CTCAGCGTCCGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGT 71855
Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125
|| | || |||||||| ||||| || || | ||| || || | ||||
Sbjct 71856 GGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCC 71915
Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | || || |||||||| || | ||||| || ||||| |||||
Sbjct 71916 ACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422257249558364
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |