Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq13 111 1e-19
seq57 95.1 1e-14
>seq13
Length=120561
Score = 111 bits (122), Expect = 1e-19
Identities = 155/215 (72%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || ||| || || || || || ||||||| || || ||||||
Sbjct 71756 CACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCATCCTC 71815
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647
||||| || || || | ||||| || ||||||||||| ||||| |||||||||| |||
Sbjct 71816 AAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTG 71875
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
| || || || || | |||| |||||| | ||| ||||| | || | || |
Sbjct 71876 T-ATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCT 71934
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||| || || |||||||| || |||||||| |||
Sbjct 71935 TGCCTGTGAGTGTTTTTACGAATATCTGCATCGCT 71969
>seq57
Length=32437
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 118547 CTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTA 118606
||| || || ||||||||||| |||| | | || |||||| ||||| || || || |
Sbjct 25926 CTCCTTCTGTATGTTGTAATCACTCAGACTACGTCCATCCTCAAGCTGCTTGCCCGCAAA 25985
Query 118607 GATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTG 118666
|| || |||||||| || ||||| |||||||||||||| ||||||| | ||| || |
Sbjct 25986 AATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTTAATTTTATTTTTTACATT 26045
Query 118667 TTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 118726
| ||||| | ||||||||| | || | || || || || || || || ||
Sbjct 26046 ACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAAC 26105
Query 118727 AAAAATCTGCAT 118738
|| || |||||
Sbjct 26106 GAATATTTGCAT 26117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433828396110268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |