Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq13 102 6e-17
>seq13
Length=120561
Score = 102 bits (112), Expect = 6e-17
Identities = 163/233 (70%), Gaps = 1/233 (0%)
Strand=Plus/Plus
Query 45104 TCTTCGCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAG 45163
|||| |||||| | || || | |||||||||||||||||||||||||| || || |||
Sbjct 71734 TCTT-GCCACCCCGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAG 71792
Query 45164 TCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCG 45223
||| |||| || | || || || || || || || ||||| | || || || |||
Sbjct 71793 TCGCTCAGCGTCCGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCG 71852
Query 45224 GGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCC 45283
|| || | |||||||||||| || || ||| || | | | | |||| |
Sbjct 71853 GGTGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGAC 71912
Query 45284 TCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| | || || |||||||| || || || || || || || |||||
Sbjct 71913 TCCACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073375122959
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