Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 2e-27
>seq5
Length=183138
Score = 138 bits (152), Expect = 2e-27
Identities = 300/443 (68%), Gaps = 11/443 (2%)
Strand=Plus/Plus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|| |||| ||||| ||||| || | ||||||||||| | |||||||| || ||||
Sbjct 59768 TTATTGCGTTTGCGTGTGTTGAGGGGCTGTTCTTTAGTGGATCGTTCGCATCTATCTTCT 59827
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| | || || | ||| || |||| ||||| || | ||| || ||||| || || | |
Sbjct 59828 GGCTGAAAAAACGCGGTCTTATGCCCGGTCTTACATTCTCTAACGAGTTGATATCACGTG 59887
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAA--AAAGGGTTTT--GTTGAT 102091
|||| || || ||| | ||||| || | || |||| ||| | | | | ||
Sbjct 59888 ACGAGGGCCTGCATTATCAATTTGC-TG--TTCTTATGAACAAAACGCTCATCGGCCAAT 59944
Query 102092 ACCCCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAA 102151
||| | |||| || | ||| || ||||| | || || || ||||||| ||||
Sbjct 59945 GCCCAA--AAGAAAAGGTATTA--GAGATTGTGAAGGAGGCAGTGGAAATTGAAGAAGAG 60000
Query 102152 TTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAG 102211
||| || | | || ||||||| | | | || |||||||||||||||||| |||||
Sbjct 60001 TTTGTCTCTGACTCTTTGCCTGTGTCACTGATCGGTATGAACTGCAAGTTGATGTGCCAG 60060
Query 102212 TACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAAT 102271
||||||||||| || || ||| | || | ||||| |||| | | | || ||
Sbjct 60061 TACATTGAATTCGTTGCGGATGGAATACTTGTTGATTTGGGCATTGGACGTGTGTACAAC 60120
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| || || || || |||||||| |||||||| || ||||| || || |||
Sbjct 60121 GTAACGAATCCGTTTGATTTCATGGAGAATATTTCGCTGTTTGGGAAGACGAATTTCTTT 60180
Query 102332 GAAAAGAGAGTCGCCGAGTATCA 102354
|| ||||| || || ||||| ||
Sbjct 60181 GAGAAGAGGGTTGCTGAGTACCA 60203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989579194641945
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |