Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq16 87.8 3e-12
seq1 87.8 3e-12
>seq16
Length=116485
Score = 87.8 bits (96), Expect = 3e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006
||| || |||||||| ||||| || ||| | || | ||| | | | ||||||| ||
Sbjct 65343 CATGAACAGATCAGGTATCCACAGCGCTGTGAAAATATCGCGTGCACGCAGCTCCTCTTT 65402
Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066
|| || ||||| | ||| |||||| | | ||||| || |||||||| || | |||
Sbjct 65403 ACCCGTGTTCTTGCGTATATCAAGGAACTCAAAGATATCGGAGTGCCACGGCTCGACGTA 65462
Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109
|| ||||| |||||||||||| || || || ||||| |||
Sbjct 65463 GATCGCCATCGATCCCGGTCGTTTCTTGCCGCCTTGATCAATG 65505
>seq1
Length=243087
Score = 87.8 bits (96), Expect = 3e-12
Identities = 117/163 (72%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 79947 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTT 80006
||| || |||||||| ||||| || ||| | || | ||| | | | ||||||| ||
Sbjct 194813 CATGAACAGATCAGGTATCCACAGCGCTGTGAAAATATCGCGTGCACGCAGCTCCTCTTT 194872
Query 80007 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 80066
|| || ||||| | ||| |||||| | | ||||| || |||||||| || | |||
Sbjct 194873 ACCCGTGTTCTTGCGTATATCAAGGAACTCAAAGATATCGGAGTGCCACGGCTCGACGTA 194932
Query 80067 TATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109
|| ||||| |||||||||||| || || || ||||| |||
Sbjct 194933 GATCGCCATCGATCCCGGTCGTTTCTTGCCGCCTTGATCAATG 194975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718265397201560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |