Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq57 91.5 1e-13
seq13 89.7 5e-13
>seq57
Length=32437
Score = 91.5 bits (100), Expect = 1e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATA 143052
|| || |||||||||||||| |||| | | || | || || || || || || ||| |
Sbjct 25927 TCCTTCTGTATGTTGTAATCACTCAGACTACGTCCA-TCCTCAAGCTGCTTGCCCGCAAA 25985
Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 143112
|| || || ||||| || ||||| ||||| || ||||| ||||||| | ||||| |
Sbjct 25986 AATAAGCCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTTAATTTTATTTTTTACATT 26045
Query 143113 TTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 143172
| |||||| | || || || |||| || | ||||| || || | ||| || ||
Sbjct 26046 ACTTATCGTGTCTGAAGGCTCGACCTCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAAC 26105
Query 143173 GAATATTTGCAT 143184
||||||||||||
Sbjct 26106 GAATATTTGCAT 26117
>seq13
Length=120561
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/205 (71%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 142994 TCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATA 143052
|| || ||||| || || ||||||| || | || | || || || || || || ||| |
Sbjct 71775 TCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCA-TCCTCAAGCTGCTTGCCCGCAAA 71833
Query 143053 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTG 143112
|| || |||||||||||||| ||||| || || ||||| || || |||| |
Sbjct 71834 TATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATT 71893
Query 143113 TTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTAC 143172
|| | ||||| | | || || |||| || | |||||||| || | |||||||||
Sbjct 71894 CTCGATGGTGTCGGACGACTCCACCTCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTAC 71953
Query 143173 GAATATTTGCATAGCT-TATGTTTT 143196
|||||| ||||| ||| | ||||||
Sbjct 71954 GAATATCTGCATCGCTCTTTGTTTT 71978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507011998019280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |