Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq57 89.7 4e-13
>seq57
Length=32437
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
||||| |||| || | ||| | ||| | ||| ||||| || || || || ||||| |
Sbjct 25891 CCTCCCCTCAGCCTAAGCACAAGATGCAACGTACTCTCCTTCTGTATGTTGTAATCACTC 25950
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| ||| |||| || | || || || ||||| || | ||| |||||||| ||||
Sbjct 25951 AGACTACGTCCATCCTCAAGCTGCTTGCCCGCAAAAATAAGCCGCTGCTGGTCAGGAGGA 26010
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| || || || || |||||| | ||| || || | || |||| ||||| ||
Sbjct 26011 ATGCCCTCCTTGTCCTTAATTTTATTTTTTACATTACTTATCGTGTCTGAAGGCTCGACC 26070
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | |||||| || ||||| || | ||||| || |||||||||||
Sbjct 26071 TCAAGCGTAATGGTCTTACCCGTGAGTGTCTTAACGAATATTTGCAT 26117
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354775961260092
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |