Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq13 84.2 1e-11
>seq13
Length=120561
Score = 84.2 bits (92), Expect = 1e-11
Identities = 147/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 38108 CACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTC 38167
|||||| || || ||||||||||| || ||||| || || || ||| | || ||
Sbjct 71756 CACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTCAGCGTCCGTCCATCCTC 71815
Query 38168 TAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCAT 38227
| || || || |||||||| || ||||| ||||||| || | || || ||||||
Sbjct 71816 AAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGTATCCCCTCCTTGTCCTG 71875
Query 38228 AATTTTTTGCTTCACATTCTGGACAGTATC--TCCACTTTCAACTTCTAATGTAATAGTT 38285
|| || ||| ||||||| || || || | || || || || | ||| || ||
Sbjct 71876 TATCTTCGCCTTTACATTCTCGATGGTGTCGGACGAC--TCCACCTCAAGTGTTATTGTC 71933
Query 38286 TTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || | ||||| ||||||||||||||
Sbjct 71934 TTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945652857949
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |