Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279 5.1_202011-03-22] 379 sequences; 6,118,689 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq13 95.1 1e-14 seq57 82.4 6e-11 >seq13 Length=120561 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| || || || ||||| | || || || || | || ||||| ||||| | | Sbjct 71966 GATGCAGATATTCGTAAAAACACTCACAGGCAAGACAATAACACTTGAGGTGGAGTCGTC 71907 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||| ||| | || || | || || || || ||||||||||| || ||||||||||| Sbjct 71906 CGACACCATCGAGAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCACCCGATCA 71847 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374 ||||| || |||||||| ||||| ||| | |||||| Sbjct 71846 GCAACGACTCATATTTGCGGGCAAGCAGCTTGAGGAT 71810 >seq57 Length=32437 Score = 82.4 bits (90), Expect = 6e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || ||||| || | || ||||| || | || ||||| || || | | Sbjct 26117 ATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTTCA 26058 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | ||| | |||||| | ||||||||||| ||||| || || || Sbjct 26057 GACACGATAAGTAATGTAAAAAATAAAATTAAGGACAAGGAGGGCATTCCTCCTGACCAG 25998 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCT--CCGATTACA 22396 || || ||||| ||||| ||||| ||| | |||||| || | |||| ||||||| Sbjct 25997 CAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTA--GTCTGAGTGATTACA 25940 Query 22397 ACATTCAAAAAGA 22409 |||| || || || Sbjct 25939 ACATACAGAAGGA 25927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726061250135