Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq13 95.1 1e-14
seq57 82.4 6e-11
>seq13
Length=120561
Score = 95.1 bits (104), Expect = 1e-14
Identities = 115/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| || || || ||||| | || || || || | || ||||| ||||| | |
Sbjct 71966 GATGCAGATATTCGTAAAAACACTCACAGGCAAGACAATAACACTTGAGGTGGAGTCGTC 71907
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||| ||| | || || | || || || || ||||||||||| || |||||||||||
Sbjct 71906 CGACACCATCGAGAATGTAAAGGCGAAGATACAGGACAAGGAGGGGATACCACCCGATCA 71847
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGAT 22374
||||| || |||||||| ||||| ||| | ||||||
Sbjct 71846 GCAACGACTCATATTTGCGGGCAAGCAGCTTGAGGAT 71810
>seq57
Length=32437
Score = 82.4 bits (90), Expect = 6e-11
Identities = 135/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || ||||| || | || ||||| || | || ||||| || || | |
Sbjct 26117 ATGCAAATATTCGTTAAGACACTCACGGGTAAGACCATTACGCTTGAGGTCGAGCCTTCA 26058
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | ||| | |||||| | ||||||||||| ||||| || || ||
Sbjct 26057 GACACGATAAGTAATGTAAAAAATAAAATTAAGGACAAGGAGGGCATTCCTCCTGACCAG 25998
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCT--CCGATTACA 22396
|| || ||||| ||||| ||||| ||| | |||||| || | |||| |||||||
Sbjct 25997 CAGCGGCTTATTTTTGCGGGCAAGCAGCTTGAGGATGGACGTA--GTCTGAGTGATTACA 25940
Query 22397 ACATTCAAAAAGA 22409
|||| || || ||
Sbjct 25939 ACATACAGAAGGA 25927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726061250135
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |