Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 5e-18
seq10 104 6e-17
>seq13
Length=120561
Score = 107 bits (118), Expect = 5e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || || || || | || | |||||| || || || ||||||||||||
Sbjct 71739 CCACCCCGCAGCCTGAGCACCAAGTGCAGCGTGCTCTCCTTCTGTATATTATAGTCGCTC 71798
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
||||| ||||| || || | || || || || || || || || || ||| |||
Sbjct 71799 AGCGTCCGTCCATCCTCAAGCTGCTTGCCCGCAAATATGAGTCGTTGCTGATCGGGTGGT 71858
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || ||||| || ||||| || || || || || | ||| ||| || ||
Sbjct 71859 ATCCCCTCCTTGTCCTGTATCTTCGCCTTTACATTCTCGATGGTGTCGGACGACTCCACC 71918
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || || ||||| || || || || || ||||||||||||||
Sbjct 71919 TCAAGTGTTATTGTCTTGCCTGTGAGTGTTTTTACGAATATCTGCAT 71965
>seq10
Length=142875
Score = 104 bits (114), Expect = 6e-17
Identities = 331/508 (65%), Gaps = 4/508 (1%)
Strand=Plus/Minus
Query 325145 GGAATGTTCGTCGACCATCCGGTTCCGATACCACTCGATCCATTCACCAGGATACTCGGA 325204
|| || || ||| |||| || || || |||||| | || ||||| || | | ||
Sbjct 35241 GGTATCTTGGTCAACCACCCCGTACCAATACCATCAGCACCGTTCACAAGCACCATTGGC 35182
Query 325205 ATAACAGGCACATAATACTCTGGTTCGATCTTATCGCCGTCGTCGTACATATATTTCAGA 325264
| | ||| || ||| | | ||||| || || | || || ||||| ||||||
Sbjct 35181 ACGATAGGAACGTAAAATGCAGGTTCTATTTTCAGGTTATCCTCTATGATATAATTCAGA 35122
Query 325265 AGATTGTCGTCCGTATCGACGAAAACCTGTCGAGTCTGAGGGTTCAGTTTCatatatata 325324
||| || || | || ||||| | || ||| || | ||| || || | ||
Sbjct 35121 AGAGCATCATCGCTCTCTACGAATATCTTTCGGGTAATATTCGCCAGATTTGTAAAAATG 35062
Query 325325 tatCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCCGGC 325384
|| ||||| || ||| || ||||| |||| | || ||||| || || | ||
Sbjct 35061 TAACGTGCGGAAGCCGCATCTTTGCCACCTTGCAGGCGCGTGCCGAATTGACCGGCTGGT 35002
Query 325385 AACAACCAG-TTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGTCCC 325443
||| ||| |||| || ||||| || ||| |||| |||||||| || | || |||
Sbjct 35001 T-CAAGCAGGTTGACATTGTTGCTCCCAACAAAATCATGTGCAAGCTTGATAATCGTCTG 34943
Query 325444 TTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAACTG 325503
|||| | ||||| |||||||| || ||||| ||||| ||||| || |||
Sbjct 34942 CTGCAAACTCATCTCGCCGTGGTGATATGCCGAGTGCTCGGCAACATAACCCACGAGCTG 34883
Query 325504 TGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAA-TATATCACTTTCCGTT 325562
|||||||| | |||| | | ||| | ||| ||||| | || |||||||| || |
Sbjct 34882 GGCAACCTTAATCTCGGATTTAAGATTCCTCTT-AAAGCAACAGTACATCACTTTTCGCT 34824
Query 325563 GAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCGAGA 325622
| ||| || |||||||| || | || || ||||| || | ||| | ||||
Sbjct 34823 GTCCAGGCTTAAAACCATCCACCATGGAAGGTATGCTACGCACATTATCTGCCATAGAGA 34764
Query 325623 ACAAAATAAGTTCCTTGTCGATGAAGTC 325650
||||||| || || |||| ||||||||
Sbjct 34763 ACAAAATGAGCTCTTTGTTAATGAAGTC 34736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179648671671962
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