Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq10 123 5e-23
>seq10
Length=142875
Score = 123 bits (136), Expect = 5e-23
Identities = 340/511 (67%), Gaps = 10/511 (2%)
Strand=Plus/Minus
Query 297266 GGGATATTAGTCGACCAACCGGTACCGATTCCACTCGAACCATTCACCAGAATGCTCGGA 297325
|| || || ||| |||| || ||||| || ||| | ||| ||||| || | | ||
Sbjct 35241 GGTATCTTGGTCAACCACCCCGTACCAATACCATCAGCACCGTTCACAAGCACCATTGGC 35182
Query 297326 ATAACAGGCACATAATACTCTGGTTCGATCTTGTCACCGTCATCATACA-GATAT--TTC 297382
| | ||| || ||| | | ||||| || || || || ||| | | ||||| |||
Sbjct 35181 ACGATAGGAACGTAAAATGCAGGTTCTATTTT--CAG-GTTATCCTCTATGATATAATTC 35125
Query 297383 AGAAGATTATCGTCCGTATCGACGAAAACCTGTCGAGTCTGAGGGTTCAGTTTTGTGAAA 297442
|||||| ||| || | || ||||| | || ||| || | ||| ||||| |||
Sbjct 35124 AGAAGAGCATCATCGCTCTCTACGAATATCTTTCGGGTAATATTCGCCAGATTTGTAAAA 35065
Query 297443 ATATATCGTGCACTCGCGTGATCCTTACCACCCTGCAATCTCGAACCGAACTGGCCCTCC 297502
|| || ||||| || ||| || ||||| |||| | || ||||| || || |
Sbjct 35064 ATGTAACGTGCGGAAGCCGCATCTTTGCCACCTTGCAGGCGCGTGCCGAATTGACCGGCT 35005
Query 297503 GGCAACAACCAG-TTGATGTTATTGCTTCCGACATAATCCTGTGCAAGGTTCACGATGGT 297561
|| ||| ||| |||| || ||||| || ||| |||| |||||||| || | || ||
Sbjct 35004 GGTT-CAAGCAGGTTGACATTGTTGCTCCCAACAAAATCATGTGCAAGCTTGATAATCGT 34946
Query 297562 CCCTTGCAGAGATGCTTCGCCATGGTGATAGGCGCTATGCTCTGCAACGTAACCGCTGAA 297621
| |||| | ||||| |||||||| || ||||| ||||| ||||| ||
Sbjct 34945 CTGCTGCAAACTCATCTCGCCGTGGTGATATGCCGAGTGCTCGGCAACATAACCCACGAG 34886
Query 297622 CTGTGCAACCTTCACGTCGGTCGTCAAATTGCGCTTGAAAGCTGAA-TATATCACTTTCC 297680
||| |||||||| | |||| | | ||| | ||| ||||| | || |||||||| |
Sbjct 34885 CTGGGCAACCTTAATCTCGGATTTAAGATTCCTCTT-AAAGCAACAGTACATCACTTTTC 34827
Query 297681 GTTGAGAAGGTTTGAAACCATCAACGACCGACGGAATGCTTCGTTCCAGATCGTACCGCG 297740
| || ||| || |||||||| || | || || ||||| || | ||| | |
Sbjct 34826 GCTGTCCAGGCTTAAAACCATCCACCATGGAAGGTATGCTACGCACATTATCTGCCATAG 34767
Query 297741 AGAACAAAATAAGTTCCTTGTCGATGAAGTC 297771
|||||||||| || || |||| ||||||||
Sbjct 34766 AGAACAAAATGAGCTCTTTGTTAATGAAGTC 34736
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102874644483650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |