Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Vavraia_20culicis_20subsp._20floridensis_20[genbank_20GCA_5F00019279
5.1_202011-03-22] 379 sequences; 6,118,689 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq16 102 1e-16
seq1 102 1e-16
seq10 86.0 7e-12
>seq16
Length=116485
Score = 102 bits (112), Expect = 1e-16
Identities = 596/937 (64%), Gaps = 28/937 (3%)
Strand=Plus/Plus
Query 113726 TCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTC 113785
|| || |||| |||||||| | |||||| | |||||| | || | || || ||
Sbjct 64273 TCAGCTGCCAGATCAATCAAACTACGCATCTTCAGCTCCCACGCTGTCTTATAAAGCCTC 64332
Query 113786 TTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGA 113845
|| || || || || ||| || | || |||| || || | ||| | || ||
Sbjct 64333 TTTATCTCGTCCGGTATACCCTCAATTCTTTGAATACTTCCCTCTTCCTGTATCAGGATG 64392
Query 113846 TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTG 113905
| |||||| || | ||| ||| | ||| | || || | || || | | | |||
Sbjct 64393 TTCTTCATCTCATCGCTCCATAGATTGAGCTTCATCAGGTCGTGCATCAGGTACGTGTTG 64452
Query 113906 ACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCA 113965
|| || ||||||||||| || ||||| | | ||| ||||| || ||| | ||||||
Sbjct 64453 ACCACCTGGAACTCACCCGCAAGCGTGCGGCGCGTATAAATATTCGTGGTGAAGGGCTCA 64512
Query 113966 AAGCACTCATTGTTACCCAAG-ATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAG 114024
|||||||| ||| ||||| || || || | |||| || |||||||| |||| | ||
Sbjct 64513 AAGCACTCGTTG-TACCCGAGTATCTGAGAGGTGCTTGCAGTGGGCATTAGTGCAACAAG 64571
Query 114025 AAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGT 114083
| | || | | ||| | ||| || || | | ||| | ||| || | ||
Sbjct 64572 CAAGGAATTCCTCACACCATACTTCGCT-ATCCTGGCACGGAGACCCCGCCAATCATGGT 64630
Query 114084 TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATC 114143
| | | | || | | |||||||||||| || || | || || || ||
Sbjct 64631 TTGTCACAGGCACCACGTTCCACATATCAAAATGCAGCACGCCCTGACTCATCGGGCTTC 64690
Query 114144 CCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTG 114203
| ||| | | || || || || | ||| ||| | || ||||||| || || ||||
Sbjct 64691 CTTCATAGCTGTCATACGGCCCATACTCCTTCGCAAGCTCACAGCTCGCATCAAGTGCTG 64750
Query 114204 CGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACG 114263
| || || || ||||| ||||| ||| | || ||||| | |||||| |||
Sbjct 64751 CAAAATGAATCGTTTCAAATATGCGCAAATTTACGGCACGCGCCTCCTTTGAATCATACG 64810
Query 114264 CGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGA 114322
| || || || | ||| ||||| || || || || || || ||||| || || |||
Sbjct 64811 -GCATCCTCAGCATCACAAAAACATCAGCAAGGCCCTGCACTCCAAGGCCGATGGGACGA 64869
Query 114323 TGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACC 114379
||| | | |||| || | ||||| | ||||| ||||| || || ||
Sbjct 64870 TGTTTGAGATTACTGTTCC---TTGTCTCGGGTAGAGGATACAAATTTACGTCTATCACT 64926
Query 114380 CTATTTAGATTTTTGGTGACAACCTTTGTG---ATTTCATGAAGCTTTTCGTAATCAAAA 114436
| || || || || ||||| ||| ||| |||| || ||||| || || || |||
Sbjct 64927 TTGTTGAGGTTCTTTACGACAATCTTGGTGACCATTT--TG-AGCTTCTCATAGTC-AAA 64982
Query 114437 CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 114496
||| |||| | || ||| || | || | | ||| || |||| |||||||| |
Sbjct 64983 CTGGCCGTCT-TGCA-TGA---ACCTGGGCAAGCCGAGGGATGCCAAGTTACACACCGCT 65037
Query 114497 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTG 114556
| || | || || |||||||| || ||||||| || | || | || || |||
Sbjct 65038 ATTTCGTTCTCCTCGGTGTACTCCATTATTTCCGAGCATAGGTTGCTGCATTTGATCGTG 65097
Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616
|| | || ||| ||||| | | | || | ||| ||||| |||||| |||||
Sbjct 65098 CCAAGGTGCTTCTGATTGTTCATCCTATTCGCTGAATCTTTGTAGCACATGTACGGCGTG 65157
Query 114617 CCCGTCTCCGTTTGGGACT--TGAGAATAGCCTTCCA 114651
|| ||||| | | |||| | ||||||||||||||
Sbjct 65158 CCAGTCTCGATCT--GACTGCTCAGAATAGCCTTCCA 65192
>seq1
Length=243087
Score = 102 bits (112), Expect = 1e-16
Identities = 596/937 (64%), Gaps = 28/937 (3%)
Strand=Plus/Plus
Query 113726 TCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTC 113785
|| || |||| |||||||| | |||||| | |||||| | || | || || ||
Sbjct 193743 TCAGCTGCCAGATCAATCAAACTACGCATCTTCAGCTCCCACGCTGTCTTATAAAGCCTC 193802
Query 113786 TTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGA 113845
|| || || || || ||| || | || |||| || || | ||| | || ||
Sbjct 193803 TTTATCTCGTCCGGTATACCCTCAATTCTTTGAATACTTCCCTCTTCCTGTATCAGGATG 193862
Query 113846 TCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTG 113905
| |||||| || | ||| ||| | ||| | || || | || || | | | |||
Sbjct 193863 TTCTTCATCTCATCGCTCCATAGATTGAGCTTCATCAGGTCGTGCATCAGGTACGTGTTG 193922
Query 113906 ACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCA 113965
|| || ||||||||||| || ||||| | | ||| ||||| || ||| | ||||||
Sbjct 193923 ACCACCTGGAACTCACCCGCAAGCGTGCGGCGCGTATAAATATTCGTGGTGAAGGGCTCA 193982
Query 113966 AAGCACTCATTGTTACCCAAG-ATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAG 114024
|||||||| ||| ||||| || || || | |||| || |||||||| |||| | ||
Sbjct 193983 AAGCACTCGTTG-TACCCGAGTATCTGAGAGGTGCTTGCAGTGGGCATTAGTGCAACAAG 194041
Query 114025 AAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGT 114083
| | || | | ||| | ||| || || | | ||| | ||| || | ||
Sbjct 194042 CAAGGAATTCCTCACACCATACTTCGCT-ATCCTGGCACGGAGACCCCGCCAATCATGGT 194100
Query 114084 TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATC 114143
| | | | || | | |||||||||||| || || | || || || ||
Sbjct 194101 TTGTCACAGGCACCACGTTCCACATATCAAAATGCAGCACGCCCTGACTCATCGGGCTTC 194160
Query 114144 CCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTG 114203
| ||| | | || || || || | ||| ||| | || ||||||| || || ||||
Sbjct 194161 CTTCATAGCTGTCATACGGCCCATACTCCTTCGCAAGCTCACAGCTCGCATCAAGTGCTG 194220
Query 114204 CGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACG 114263
| || || || ||||| ||||| ||| | || ||||| | |||||| |||
Sbjct 194221 CAAAATGAATCGTTTCAAATATGCGCAAATTTACGGCACGCGCCTCCTTTGAATCATACG 194280
Query 114264 CGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGA 114322
| || || || | ||| ||||| || || || || || || ||||| || || |||
Sbjct 194281 -GCATCCTCAGCATCACAAAAACATCAGCAAGGCCCTGCACTCCAAGGCCGATGGGACGA 194339
Query 114323 TGTCTCATATTAGACTTTCGAGCGGTCTC---CACGGGATAAAAATTCCTATCGATAACC 114379
||| | | |||| || | ||||| | ||||| ||||| || || ||
Sbjct 194340 TGTTTGAGATTACTGTTCC---TTGTCTCGGGTAGAGGATACAAATTTACGTCTATCACT 194396
Query 114380 CTATTTAGATTTTTGGTGACAACCTTTGTG---ATTTCATGAAGCTTTTCGTAATCAAAA 114436
| || || || || ||||| ||| ||| |||| || ||||| || || || |||
Sbjct 194397 TTGTTGAGGTTCTTTACGACAATCTTGGTGACCATTT--TG-AGCTTCTCATAGTC-AAA 194452
Query 114437 CTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAG 114496
||| |||| | || ||| || | || | | ||| || |||| |||||||| |
Sbjct 194453 CTGGCCGTCT-TGCA-TGA---ACCTGGGCAAGCCGAGGGATGCCAAGTTACACACCGCT 194507
Query 114497 GTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTG 114556
| || | || || |||||||| || ||||||| || | || | || || |||
Sbjct 194508 ATTTCGTTCTCCTCGGTGTACTCCATTATTTCCGAGCATAGGTTGCTGCATTTGATCGTG 194567
Query 114557 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTC 114616
|| | || ||| ||||| | | | || | ||| ||||| |||||| |||||
Sbjct 194568 CCAAGGTGCTTCTGATTGTTCATCCTATTCGCTGAATCTTTGTAGCACATGTACGGCGTG 194627
Query 114617 CCCGTCTCCGTTTGGGACT--TGAGAATAGCCTTCCA 114651
|| ||||| | | |||| | ||||||||||||||
Sbjct 194628 CCAGTCTCGATCT--GACTGCTCAGAATAGCCTTCCA 194662
>seq10
Length=142875
Score = 86.0 bits (94), Expect = 7e-12
Identities = 189/283 (67%), Gaps = 8/283 (3%)
Strand=Plus/Minus
Query 171875 AGTTTTGTGAAGATGTACCTCGTTTGAGACGCATCTTTGCCACCCATGAGACGCGTCCCA 171934
|| ||||| || ||||| | | || ||||||||||||||| || ||||| ||
Sbjct 35076 AGATTTGTAAAAATGTAACGTGCGGAAGCCGCATCTTTGCCACCTTGCAGGCGCGTGCCG 35017
Query 171935 AATTGACCACACGGTTCAAGGAGATTGATATTGTTTGAACCCATGTAGTCATTGGCCAAC 171994
|||||||| |||||||| || |||| |||||| || | | |||| || | |
Sbjct 35016 AATTGACCGGCTGGTTCAAGCAGGTTGACATTGTTGCTCCCAACAAAATCATGTGCAAGC 34957
Query 171995 TTGACAATCGTATCCGCGAGGGAGACT----TCACCGTGATGGTAGGCCGACTTGTCCGC 172050
|||| |||||| | | | | ||| || ||||| || || ||||| | || ||
Sbjct 34956 TTGATAATCGTCT----GCTGCAAACTCATCTCGCCGTGGTGATATGCCGAGTGCTCGGC 34901
Query 172051 GACATACGCCGCCAACTGTGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGAAGCACGC 172110
||||| || | | ||| || ||||| ||||| || || ||| | | |||||
Sbjct 34900 AACATAACCCACGAGCTGGGCAACCTTAATCTCGGATTTAAGATTCCTCTTAAAGCAACA 34841
Query 172111 ATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATG 172153
||||| || |||| |||| |||||| | || || |||||
Sbjct 34840 GTACATCACTTTTCGCTGTCCAGGCTTAAAACCATCCACCATG 34798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597350770037320
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